Cynara cardunculus var. scolymus (artichoke): 112509954
Help
Entry
112509954 CDS
T05604
Name
(RefSeq) eukaryotic translation initiation factor 2A
KO
K15026
translation initiation factor 2A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112509954
03012 Translation factors [BR:
ccav03012
]
112509954
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112509954
Translation factors [BR:
ccav03012
]
Eukaryotic type
Initiation factors
eIF-2A
112509954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_Prp19
RMC1_N
WDR55
B-prop_COPA_B_2nd
EIF3I
DUF7165
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
112509954
NCBI-ProteinID:
XP_024970949
LinkDB
All DBs
Position
LG 3:complement(7564419..7575678)
Genome browser
AA seq
517 aa
AA seq
DB search
MSVANSSPALEILVREPGGLAIWNGPPFTNNQPSIKLDRVPCTSAKFSEDGSKLMVIKSE
STISIYDCKSSKEIRSFESSNILAAALSPCGTYLQTFQKVSSPQEKNVTVWKTETGESVY
TLSQKNMTKATWPSIRFSSDEAVASRMATNELQFFDAGDFSKGIVHKIRIPGIAAAELSK
KPGSHVAAFVPESKGMPASVQIYACAPDSQSQPIARRSFFRCSTVQQHWNHGSTGVLVVV
QSDVDKTNQSYYGESKLNYLTLDGTHDGLVPLRKEGPVHDVQWSYSGKEFAVVYGFMPAM
ATIFDKKCNPLLELGTGPYNTIRWNPKGRFICVAGFGNLPGDMAFWDYVEKKQLGTTKAE
WSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHYNGSLFFKKMFEKLYQVDWKADSPDKF
GEIEELVKSVGSLKVESKPQGQGSKSSQTSVKPTSTNPPVQKKPAAYQPPHAKAAAAKQT
ELFGGSPSGEMSKNALKNKKKREKQREKKAAEAGGAD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgcaaactcatcaccggcattggagattttagttagagaacccgggggttta
gctatatggaatggaccaccttttactaataatcaacccagtatcaagctcgatagagtt
ccttgcacaagtgccaaatttagcgaagatggatccaaattaatggtgataaagtccgag
tctacaattagcatctatgattgcaaaagctcaaaagagataagatcttttgaatcctcc
aacattcttgctgctgctttgtctccatgtggaacttatctacagaccttccagaaagtc
tcatcaccgcaggaaaagaacgtcactgtatggaagacagagacaggagaatcagtttat
actctgtcccagaagaacatgactaaagcaacatggccatcaatcagatttagctctgat
gaagcagttgcttctcgcatggcaacaaatgagcttcagttttttgatgctggagatttt
tccaaaggcatcgtgcacaagatcagaatccctggaattgctgcagcagagctttctaag
aaaccaggttcacatgtggctgcatttgttccagaatctaagggaatgcctgctagcgtt
cagatatatgcttgtgcacctgattctcagagtcaacctattgctcgtagaagtttcttc
cggtgttcaacagtgcagcaacactggaaccatggttctacaggggttctggttgtggtg
cagtcagatgttgataaaaccaaccagagttactatggagaatcaaagttaaattacttg
actttagatgggactcatgatggacttgtgccccttcgcaaagaagggcctgtacatgat
gttcaatggtcatactcaggaaaagagtttgcagttgtttatggattcatgcctgcgatg
gcaacaatttttgacaagaagtgcaaccctctgctggagcttgggacaggcccttacaat
accattcgctggaacccaaagggaagatttatatgtgtcgctgggtttggtaacctacca
ggtgacatggcattttgggactacgtagaaaaaaagcaacttgggaccactaaggctgaa
tggtcagtgacgagtgaatggtcccctgatggacgctatttcatgaccgccacaacagct
ccaaggctacaagttgacaatgggattaaaatcttccattacaatgggtcattattcttt
aagaagatgtttgagaaattgtatcaggtcgattggaaagcagattcacctgataaattt
ggtgaaattgaagaacttgtcaagtctgttggctcattaaaagtggaaagcaaaccacaa
ggacaagggtcaaaatcttcccagacctctgtgaaaccaacttccaccaatcctcctgtt
cagaagaaacctgctgcatatcaaccacctcatgcaaaggctgcagctgccaaacagaca
gagctctttggaggaagcccttcaggagaaatgagtaagaatgcattaaaaaacaagaaa
aagagggagaaacagagggagaagaaggctgcagaagctggtggtgcagattaa
DBGET
integrated database retrieval system
