Cynara cardunculus var. scolymus (artichoke): 112510017
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Entry
112510017 CDS
T05604
Name
(RefSeq) protein NRT1/ PTR FAMILY 1.2-like
KO
K26551
MFS transporter, POT/PTR family, low-affinity nitrate transporter
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112510017
Transporters [BR:
ccav02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
112510017
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Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
112510017
NCBI-ProteinID:
XP_024971039
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Position
LG 3:complement(38333172..38336902)
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AA seq
596 aa
AA seq
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MGEQVEELNQHRQLSTGKKGGLVTMPFIIANEAFEKVASYGLVPNMILYLISDYKIGVAK
GTNILFLWTAASNFAPVLGAFLSDSYLGRFLTIGLGSLFSLLGMFLLWLTTMVPNLKPPA
CNQLTETCKQATHSQYAFLIFAFIFISMGSGGVRPCSLAFGAEQIDNKNNPNNERALESF
FGWYYAAAATAVLIAFTGIVYIQDHAGWKVGFGVPAILMLLSALLFFAASTLYVKMKVKK
SLFTSFIQVIVVAYKNRKLPSQPPNADAWNHHKDSPDAVPTKKLRFLNKACIIQNPKDLT
ADGVASDPWSLCTVEQIEELKSLIRVLPLWSSGIMMSINVSQSSFPVIQASTMDRHLGSS
FQIPAGSFAFFTIAVLALWVVLYDRVILPFASKLRGKPVHLGVKLRMGIGLVFSSMAMVV
SAIVEHARRKKAIEQGLFNSPQTVVAMSAMWLVPQYCLHGLAEAFSAIGQNEFYYSEFPK
SMSSIAASLFLLGMAVANLLASLILSTIEKLTKDGRKEGWIATNINQGRYDSYYWVLAIM
SFANLLYFVACSWAYGPCADELVKQETKSSKDSTEELQRARSVADERQSLFSSLPS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggggagcaagtggaagagctgaaccagcacagacagctttccacaggaaagaaaggt
ggtttagtcaccatgcccttcatcatagcaaatgaggcatttgagaaggtggctagctat
ggtttggtgcccaatatgattctttatctgattagtgattacaagattggtgtggctaaa
ggcaccaacatcctctttctctggactgcagcttccaattttgctcctgttttgggtgca
tttctttcagattcatacttgggtcgatttctcaccattggtttgggttccttattctcc
cttttgggtatgtttctgctatggttaacaacaatggttccaaatctaaagccacctgct
tgcaatcaattaactgaaacctgcaaacaagccacacattctcaatatgctttcttgatc
tttgccttcatattcatttcaatgggatcagggggtgtaagaccatgttctttagcattt
ggtgctgaacaaatagacaataaaaacaatcccaataatgagagggcattagagagcttt
tttggatggtattatgctgctgctgcgactgcggttttgattgcgtttacgggtatcgtt
tatattcaagatcatgccggttggaaggtgggttttggggttcctgcgattcttatgttg
ttatctgcacttttgttctttgctgcttccactctgtatgtgaagatgaaagttaaaaag
agcttgttcactagcttcatacaagtgattgtggttgcttataagaaccgaaaactccca
tctcagcctccgaatgctgatgcgtggaatcatcataaagattcacccgatgccgtgccc
accaaaaaattaaggttcttgaacaaagcttgcatcattcagaacccgaaagacttgacc
gcggatggagttgcttccgatccgtggagtctatgcacggttgagcaaatcgaagaactg
aaatcactgatccgggttctgccattatggtcttcgggaatcatgatgtcgataaacgtg
agccaatcttcttttcctgtaatccaagcttccaccatggatagacaccttggatcgagc
ttccagattccggcaggctccttcgctttcttcacgatcgcggtattagcactttgggtc
gtgctttatgatcgtgttatcctcccattcgcatcaaaactccgaggaaaaccagtccat
cttggcgtcaaattaagaatgggtatcggtctagttttctcctccatggccatggtggtt
tccgccattgttgaacatgctcgaagaaagaaagcaatcgaacaagggctgttcaacagc
cctcaaaccgttgtcgccatgtcagcaatgtggttggtcccacaatactgcctccatgga
ttagcagaagcttttagtgcaatcgggcagaacgaattctactattcggagttcccgaaa
agcatgtcgagcattgctgcttctcttttcttgttaggaatggctgtggctaacttgttg
gctagcctgatccttagcacgatcgaaaagctcacgaaagatggtcgtaaagaagggtgg
atcgccaccaatatcaaccaaggccgctacgatagttactattgggttctagccataatg
agcttcgcgaaccttttgtacttcgtggcttgcagttgggcttacggcccttgtgctgac
gaattggtgaaacaggagacgaaaagtagtaaagactcgaccgaggagttgcaacgagcg
agatccgtagcagacgaaaggcaaagcctgttttctagcttgccatcgtga
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