Cynara cardunculus var. scolymus (artichoke): 112510236
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Entry
112510236 CDS
T05604
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112510236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112510236
03036 Chromosome and associated proteins [BR:
ccav03036
]
112510236
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
112510236
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
112510236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_Gbeta
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
eIF2A
Beta-prop_WDR75_1st
Beta-prop_VPS8
Ge1_WD40
Beta-prop_RIG_1st
RMC1_N
CFAP43_N
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
112510236
NCBI-ProteinID:
XP_024971345
LinkDB
All DBs
Position
LG 3:complement(535516..537170)
Genome browser
AA seq
454 aa
AA seq
DB search
MDAGSLSSSATKSQSRCPLQEQFLQRRNSRENLDRFIPNRSAMDFDYAHYMLTEAKKGKE
NPMTSSPSREAYRKHLADSFNMNRTRILAFKNKPPTPSEAMFNDSSASVQHSKPVKARRY
IPQTSERTLDAPDLVDDYYLNLLDWGSSNVLAIALGNTVYLWDASEGNTSELVTVDDEAG
PVTSVKWAPDGRHISVGLNNSDIQLWDSTSNRLLRTLRGGHQSRVGALDWNNHILTTGGM
DGRIVNNDVRVRSHIVETYSGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASANAP
TQWLHRLEEHTAAVKALAWCPFQANLLASGGGGGDKCIKFWNTHTGSCLNSVDTGSQVCA
LLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGCTVASAAGD
ETLRFWNVFGSPDVAAKAAPKAAPEPFAHLNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggatctctaagttcttcagctaccaagtcccaatctcgatgcccccttcag
gagcaatttcttcaaagaagaaactctcgagaaaacttggacagattcattccgaataga
tcagcaatggatttcgattacgcacattacatgttaacggaagcgaagaaaggtaaggag
aatccaatgactagctcgccgtcgagggaagcgtaccggaagcatttggccgatagcttt
aacatgaaccgaaccagaattctagctttcaagaacaagcctccaaccccatcggaagcc
atgtttaacgacagctctgcttcggttcagcactcaaaacctgtaaaggcccgtagatac
attcctcagacttcagaaagaactcttgatgctcccgatcttgtcgatgattactacttg
aatctgttggattggggaagcagcaatgttcttgccattgctctaggaaacacagtgtat
ttatgggatgcttcggaaggtaatacttcggagctcgtgacagtagacgatgaagccggc
ccggtgaccagcgtcaaatgggcacccgatggtcgacacatctctgtcgggctaaacaat
tcggatatccagctctgggattcgacatctaaccgattgttgagaacattgagaggcggc
caccaatctcgagtcggagctttggattggaacaaccacatcttgaccaccggaggaatg
gatggccggatcgtaaacaacgatgtgcgagttcgatcgcatatagtcgaaacctacagc
ggccaccaccaagaagtttgcggactgaaatggtcggcttccggccagcagttagccagt
ggtggcaacgacaatctccttcacatttgggaccgatcgatggcttctgccaacgctcca
acccaatggctccaccggctcgaggagcacaccgctgcggtcaaagccctcgcgtggtgt
ccgttccaggcgaatctcctcgcttcaggtggaggtggcggcgacaagtgtataaagttc
tggaacacacacaccggctcgtgtttgaactccgtggacacgggttcgcaagtttgtgca
cttttatggaacaagaacgaacgcgaactgctgagctcacacgggttcacacagaaccaa
ttgactctatggaagtacccgtcgatggttaagatggctgaactgacgggtcatacatcg
agggttctgttcatggctcagagccctgatgggtgcacggttgcatctgcggctggcgac
gagacattgcggttttggaacgttttcgggagccccgacgtggctgcaaaggcggcaccg
aaagccgcaccggaaccgttcgctcatttgaaccgtattcgttga
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