Cynara cardunculus var. scolymus (artichoke): 112510374
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Entry
112510374 CDS
T05604
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112510374
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112510374
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112510374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
Zn_ribbon_RanBP
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112510374
NCBI-ProteinID:
XP_024971540
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Position
LG 3:1064366..1080156
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AA seq
586 aa
AA seq
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MDSEDDMHDANDAESLDDDFYSGETAMDSDDGDAADYEFIDNDSDDSNDLVSHRNQQNYT
ILNETDIQLRQEDDITKIASILSISNVAAAILLRHYNWSVSKVNDEWFADEEKVRRVVGL
LEEPRPLPNAKELTCGICFEVYPCDSMCSAACGHPFCVTCWQGYISTAINDGPGCLTLRC
PDPSCGAAVGKDMVVSLASHDDREKYRRYFLRSFVEDNRKTKWCPAPGCDYAVDFIVGGG
TFDVTCRCSYSFCWNCTEEAHRPVDCDTVSKWIMKNSAESENMNWILANSKPCPKCKRPI
EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDDTEKRRE
MAKNSLERYTHYYERWATNQSSRQKALADLQQMQSIHLEKLSDKQCQPESQLKFITEAWL
QIVECRRVLKWTYAYGYYLPEHAHAKRQFFEYLQGEAESGLERLHQCAEKELQGYLNVEG
PSKDFNEFRMKLAGLTSVTRNYFENLVRALENGLSDVDAHGGTSRTGGSRSLGAGSSKGR
TSRSKGTAARSSGSRNIDDSGHWSCDYCTFANVRSATVCQMCQQRR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaggatgatatgcacgacgcgaacgatgctgaatctcttgatgatgacttc
tacagtggggagactgctatggactccgatgatggtgatgcagccgactacgagttcatc
gataatgattccgatgattctaacgatctggtttctcatcgtaaccagcaaaactacacc
attttgaatgaaactgatattcaactacgtcaagaggatgatattacgaagatagcttct
atactttccatttcaaatgttgcggctgccatattactccgccattataactggagtgtc
agcaaagtgaatgatgaatggtttgctgatgaagaaaaggttcgcagggttgttggattg
ttggaggaaccacgcccgcttcccaatgctaaagagttgacatgtgggatttgctttgaa
gtatatccttgtgatagtatgtgttctgctgcttgtggtcatcctttttgtgtaacttgt
tggcaaggatacataagcaccgccatcaatgatggcccgggatgcttgacgctgcgatgt
cctgatccatcttgtggtgcagctgttggtaaagacatggttgtttccttggcctcacat
gatgatagagagaaatatcgacgttacttccttcgttcttttgtggaagacaatagaaag
acaaaatggtgtccggctcctggttgtgactatgctgtggacttcattgttggtggtgga
acctttgatgttacctgccgctgctcatatagcttttgctggaattgtaccgaggaagct
catcgtccagttgattgcgacactgtgtcaaagtggataatgaagaacagtgcagaatca
gagaacatgaattggatattagctaattcaaaaccatgtcccaagtgcaagcggccaatc
gagaagaaccaaggatgtatgcatatcacatgtacaccaccttgcaaatttgagttttgc
tggctttgccttggtgcatggtctgatcatggtgaaagaacaggtggtttttatgcatgc
aaccgttatgaggcagcaaaacaagagggagtgtatgatgacacagaaaagcgacgtgag
atggcaaaaaactctctagaaagatacactcattattatgaaagatgggctacaaaccaa
tcgtctagacaaaaagcactggcagatcttcagcaaatgcaaagcatacatcttgagaag
ctgagtgacaagcagtgccaacctgaatcacagcttaaattcataacagaggcctggcta
cagatagttgaatgtagacgggtactaaagtggacatatgcttacggatattatttgccc
gagcatgcgcatgccaagaggcaattctttgagtacttgcaaggtgaggcagaatctggg
ttggaacgacttcatcaatgtgcagagaaggaactacaaggttacctcaatgttgaaggt
ccttcgaaggacttcaatgagttccgtatgaaactagctgggctgaccagcgtaacccgg
aattactttgagaatctagtgagggctctagagaacggtctttcagatgttgatgctcat
ggtggaaccagccgaaccggtggctcaaggagtttgggagccgggagcagcaagggcaga
accagtaggagcaaaggaacagcagctagatcaagcggttcaagaaacatagatgattct
ggacactggtcgtgtgattattgtacatttgccaatgtcagatcagccaccgtctgccaa
atgtgccagcaacgtcgatga
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