Cynara cardunculus var. scolymus (artichoke): 112510389
Help
Entry
112510389 CDS
T05604
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
112510389
NCBI-ProteinID:
XP_024971557
LinkDB
All DBs
Position
LG 3:complement(6443382..6453962)
Genome browser
AA seq
1238 aa
AA seq
DB search
MNKENVGVGQLSDEQRARISRNFRAAKALLDRKRPRDTSNAFDSFPHKIGVVKGVETASV
VGSANRVPLSDISVKTPISVRNYKLYESGSVRSSHFKVPSVGKSDDCLLAGTRVSPDENG
KAHSSFQTPVSQVSYSGSSCAKGVSVSRIDFGHGTENPDENKLSLDSFKTPIRPLVCNVS
PGNNIPAEQKESSDYCLNERKLGAVMETNIGLTSCKTPMTHQSCSSFDESSTIMPTIFYE
DFDDSILAEIDELCESGTKPKLAAEESSCDIHLRSALAEKNSCELRTDVSALVLQDLQSD
NVSDGSSDSGCGKQESESSQALQIGGMPEEYAKYMQSLNDRQREAACSDISIPLMIVAGP
GSGKTSTMVGRVLMLLHKGIEASCILAMTFTTAAASEMRDRIGAVAGKAAAKELMISTFH
SFSLQLCRSHAEKLGRTPEFLLYGQGQQRKAVIEAVRLTETGKNLQALDSDKLCEEANVS
KNRPEDFREKSKKWLKFVAQAKASGKSFEDCQRMGNEIGAAILRKYENILESCNALDYHD
LISCSVKLLTSFPEVFKECQESWQAIVIDEFQDTSAMQYDLLRILASHKRITIVGDEDQS
IFSFNGADASGFKSFCKDFQPHKEIRLNKNYRSTRCIVDAASFLIRNNSKRCQLKKVLTD
NSSGSKIIVKECCNEDAQCAFVVDKILELTSSGSSVKGTFGEIAVLYRRQVSGKMFQTAF
RERKIPFNVHGVAFYRKKVVKAIMSMLRTTLVACDDESYRRVFKALLHLEKDEKKRVIEH
INKVSTVRKCSFISAASDIFSAKISGTFKRSHLTQGRKVLVALDMISKLAHREQSISTVI
TQVANMIPQKYLLEQRAVLDVDGGKLLNEEHDLRSVLQYMLDDVSEFLKSYNFDIHEKNG
NAADEKGCTNVLKAFIDFISERETENFRTRRRDNNHAVTLTTIHQSKGLEWDTVFIVKVN
ENEIPLLHEFNGATKETGASVEEERRLLYVAVTRARKKLFILYITMDSNWQVLQPSRFLK
EIPRHLLQVQDESSSMHLQAEDHEPPNKSSPVNDDDMQAADHAAVKTETDEAIGNLFDED
SNESNETILPCNGNDFLKRFSSEERATVSHLFHQWAKKAAFKEPKRLLDKVAFVIDERLR
AKKTAQKDVLRSLKSCLKSDEAFQYAENVLRWLQIPADKRAYITREKQEHFQKLRIESAM
GSSAATSKQIAYLQNLGCTTVPTSRLHASRLIEQYKSL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaatgtcggtgttggacaactatcagatgaacaaagggctcgaatttcc
agaaattttagagctgccaaagctcttcttgatcggaagcgccctcgagatacctctaac
gcgttcgattcatttcctcacaaaattggggttgtgaagggggttgaaactgcatctgtt
gttggcagtgccaatagagtgcctctttcagacatttcagtgaaaactcctatttcggtt
aggaactataaattatatgagagtgggtctgtcagaagttctcatttcaaggtgccatct
gttggtaaaagtgatgattgtttgcttgcggggacaagggtttcaccagatgagaatgga
aaagctcatagttcatttcagactccagtcagccaagtaagttatagtgggagttcatgt
gccaagggagtttctgtaagtagaattgacttcgggcatggtacagagaacccagacgag
aataaattaagtttggattccttcaaaactccgatcaggcctttagtttgtaatgtaagt
cctggaaacaacatcccagctgaacagaaggaatccagtgactattgtttgaatgaaagg
aaattgggtgctgttatggaaaccaatattggattaacttcatgcaagactccaatgaca
caccagtcatgttctagttttgacgagtcttccacaataatgcctaccattttttatgaa
gactttgatgattcaattctagccgaaattgatgaattatgcgagtctgggacgaagccc
aagctagcagctgaggagtctagctgtgacattcatctgaggagtgcacttgctgaaaag
aacagctgtgaactgagaactgatgtgagtgctcttgttttacaggacttacaaagtgat
aatgtttcagatggaagtagtgacagtggatgcgggaaacaagagtctgagagttctcag
gctttgcaaattggaggcatgcctgaggagtatgcaaaatatatgcagtctctaaatgat
aggcaacgggaagcagcctgcagtgacatttcaatacctttgatgattgttgctggacct
ggaagtggtaagacatctaccatggtcgggcgtgtcttaatgcttcttcacaagggcatt
gaagcatcctgcattttggctatgacattcactacggctgctgcttctgaaatgcgagat
aggattggagcagtggctgggaaggcagcagcaaaggaactgatgatcagcaccttccac
tcgttctcattgcaactctgtcgttcacatgctgagaagttaggtcgtacaccagagttt
ttgctatatggtcagggacaacaaagaaaggcagtcattgaagctgtgcgcctcacagag
actggaaagaacctacaagctttagattctgacaaactctgtgaggaggctaatgtcagt
aaaaatcgcccagaagactttagggagaagtcaaagaaatggctgaaattcgtggcacaa
gctaaagcttctgggaaatcttttgaagattgccagagaatgggaaatgagataggagct
gcaattcttagaaaatatgagaacatattagaatcatgcaatgctctggattatcacgat
ttaattagctgctctgtcaagctgcttaccagttttcctgaagttttcaaggagtgccag
gagtcatggcaagcaatcgtaatagatgagtttcaggacacaagtgctatgcaatatgat
ttgttacgaattcttgcatcacataagcgcataacaattgttggagacgaggatcagtca
atcttcagtttcaacggtgcggatgcaagtggattcaagtcattctgcaaagattttcaa
cctcacaaggagatcagactaaataagaactatcgctctacccgttgtattgttgatgct
gcatcatttcttatacggaataattcaaaacgatgtcagttgaagaaagttcttactgat
aattcttccgggtctaagattattgtcaaagaatgttgtaatgaggatgcacagtgtgct
tttgttgttgacaagatattagaacttacttcttcgggttcatctgtcaaaggcactttt
ggagagatcgctgttctttaccggagacaggtctcgggtaaaatgttccagacagccttc
cgtgaaagaaaaattccattcaatgttcatggagtcgctttctacagaaaaaaggtggta
aaggccattatgtctatgctcagaacaacattggtggcatgtgatgatgagtcatatcgg
cgagtattcaaggccctactacatctagagaaagatgaaaagaagagggtaattgaacat
attaataaagtttcaaccgtaagaaaatgcagcttcatatctgctgcatctgatatattc
agtgcaaagatctctggtaccttcaaaaggagtcatcttacccaagggcgtaaggtgttg
gttgctttagatatgatttcaaaacttgctcacagggaacaatctatttcgactgtcatc
acacaagtggcaaacatgatacctcagaagtacctccttgagcaaagagctgttcttgat
gttgatggcggcaagttgctaaacgaagaacatgatcttagatcggtgctccaatatatg
ttggatgatgtctctgagtttctaaaatcatacaactttgatatacatgagaagaacggc
aatgccgctgacgaaaaagggtgcacaaatgtacttaaagcatttatcgattttatatct
gaaagggaaacagaaaactttcgtaccaggcggcgtgacaacaatcatgctgttactctt
actaccattcatcagtccaaaggtttggagtgggacactgttttcatagtaaaggtaaat
gaaaatgaaatcccccttttgcatgaatttaatggcgccacgaaagaaaccggtgcgtct
gttgaggaggaacggcgcttactatatgtggcagtaactcgtgcaagaaagaaacttttt
attctatatatcactatggattcaaattggcaggttcttcaaccttcgcgtttcctgaaa
gaaattccaaggcatctcctacaagtccaggatgagtcaagttcaatgcatttgcaagca
gaggatcatgaacctccaaataaaagctctcctgttaatgatgatgatatgcaagctgca
gaccatgcggcagtgaaaacagaaactgatgaagccattggtaatttattcgatgaggat
tccaatgaatcgaatgaaacaatcttgccatgcaatggaaatgatttcttgaaaagattc
agcagcgaagaacgagcaactgtttcccatttattccatcaatgggccaagaaggcagca
ttcaaggaaccaaagaggttacttgacaaggttgcctttgtcattgatgaacggcttaga
gcgaagaaaactgcacaaaaggatgttcttcggtccctgaagtcatgtttgaagagcgat
gaagcattccagtatgctgaaaatgttctacgatggctgcagattcctgcagacaaacgt
gcatatattacaagggaaaaacaggaacattttcaaaagttaaggatcgagagcgcaatg
ggttcgtctgctgctacatctaagcagattgcgtacctacagaatctaggatgcaccacg
gtcccaacttcacgtctccatgcatctcgtttaatcgaacagtacaagtcactgtaa
DBGET
integrated database retrieval system
