KEGG   Cynara cardunculus var. scolymus (artichoke): 112510456
Entry
112510456         CDS       T05604                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112510456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112510456
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112510456
 Complex B
    112510456
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_DUS3L zf-CCCH_4 RBD_AKAP-17A
Other DBs
NCBI-GeneID: 112510456
NCBI-ProteinID: XP_024971648
LinkDB
Position
LG_1
AA seq 320 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP
GVDPQGQPLDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRQLFGRSRRRRSRSRSHSPQRHRGYDERPQGGGRGSGRRGGDYADQRHHDRGRRPRSRS
PGRRGGRSRSPGGKRNRSPVREGSAERRAKIEQWNREREQADSRPKSATNDNNSDDGAVP
NGDQYYDPRQQQHDDGGYDD
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcgtcgattttcggtacagaaaaggacagagtgaactgtccgttc
tacttcaagatcggagcttgtcggcatggagacagatgctccaggctccacaccaagccc
agcatcagccctaccctattactttccaacatgtaccagcgtcctgattcgattactcca
ggtgtcgatcctcagggtcaacccctcgatcctcgcaaaatccaagatcacttcgaggac
ttttatgaagatttatttgaagagctgagcaagtatggggagattgaaagtctaaacata
tgtgataatttggctgaccacatggtggggaatgtgtacgttcagtttagggaagaagaa
catgctgcaaatgctcttcagaatctgagtggaaggttttatgcaggtcgccccatcatt
gtggacttctcaccagtgacggattttcgggaagctacatgtcgacagtatgaagaaaat
gtatgcaatcgtggtggttactgcaacttcatgcatttaaaaaagataagcagggagttg
aggaggcaattatttgggagaagtcggagaaggagaagtcgaagcaggagtcatagtcct
cagaggcatcgtggttatgacgagcgtccacaaggtggtggccgaggttcaggaagaaga
ggaggtgattatgcagatcaacgacatcatgataggggcaggaggcccagaagcaggagt
cctggacgaagagggggacgtagcagaagccctggtggaaagagaaatcgtagtccagtt
agggaaggcagtgctgagagaagggcaaaaattgaacaatggaacagggaaagggagcaa
gccgactcccgtccaaaatccgccactaatgataacaatagcgatgatggtgcggtacca
aatggagaccagtattatgatcctcgtcagcagcaacatgatgatggaggttatgatgac
tga

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