Cynara cardunculus var. scolymus (artichoke): 112510481
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Entry
112510481 CDS
T05604
Name
(RefSeq) arabinosyltransferase RRA3-like isoform X1
KO
K20783
arabinosyltransferase [EC:2.4.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112510481
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112510481
Glycosyltransferases [BR:
ccav01003
]
Glycan extension
O-Glycan
112510481
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleotid_trans
CENP-H
Ax_dynein_light
Tropomyosin
SRI
YabA
TM7S3_TM198
PUMA_CC
PV-1
bZIP_2
ZapB
Motif
Other DBs
NCBI-GeneID:
112510481
NCBI-ProteinID:
XP_024971670
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Position
LG 3:complement(29168212..29170586)
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AA seq
434 aa
AA seq
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MAGPAGRRDKNTVQSIRGTRIAVAIVIGILFGGIFAFLYPHGLFSPIQTSPFQGRRLSKS
ILQIGSTACESTERMNMLKSDIIDLSRKNDELKKQVRDLTQKLMAAEQKNGKAEQQVEVI
GDPQKAGPFGSVKGIRTNPMVLPDSTVNPRLAKILKKIAVQNELIVVLANSNVKAMLEVW
FISIKKVGIPNYLVVALDDGIVDFCKENSIPFYMRDPDEGIDSVAKTGGNHAVSGLKFRI
LREFLQLGYSVLLSDVDIVYIQNPFDHIYRDSDVESMSDGHDNMTAYGYNDVSDDPSMGW
ARYAHTMRIWVYNSGFFYLRPTLPALELLDRVAERLSHPPPAWDQAVFNEELFFPSHPGY
IGLHASKRTMDRYLFMNSKTLFKEVRKDGDLNKMKPVIVHINYHPDKLPRMKAVMEFYFD
GKKDALEPFPDGSE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctgcgggtcggagagacaagaacacagttcaatcgatacgtggaacccga
atcgccgttgcaattgtgatcggaattctattcggaggcatcttcgcttttttgtaccct
catggtctcttctctccgattcaaacttctccatttcaaggtcgccgtctttccaaatcg
attctccagattggatcaactgcatgtgaatccacagagagaatgaacatgttgaaatca
gacattatagatttatcgaggaagaacgatgagttaaagaagcaggttagggatttaact
caaaaattgatggcagctgaacagaaaaacggaaaggctgagcagcaagttgaggtgatc
ggtgatccccaaaaagctgggcctttcggtagtgtcaagggtataagaaccaaccctatg
gtccttccagacagcactgtaaacccgagacttgcaaaaatcttgaaaaagatcgccgtt
caaaatgagcttatagttgtacttgcaaattctaacgttaaagccatgttggaggtgtgg
ttcatcagcattaagaaagtaggcatacccaattatctagtggtggctttagacgatggg
attgtggatttttgcaaagaaaacagcatacccttttacatgcgagatccagatgagggt
atcgattcagtggctaaaacaggtggtaatcatgccgtttcaggattgaagttcagaatc
ttgagggagtttttgcagttgggttacagtgttcttctgtcggatgttgatattgtatac
atacagaacccttttgatcatatctatagggattcagatgttgaatctatgtctgatgga
catgataatatgactgcatacggatataacgatgtttctgatgatccttctatggggtgg
gctagatatgctcatacgatgcgaatatgggtctataactctggatttttctatctacga
cctactttacctgcactcgagcttttagatcgtgtggctgagaggctctcccacccacca
ccggcttgggatcaggctgttttcaatgaagagctgttcttcccgtctcatccgggttac
attgggcttcatgcttccaagagaacgatggatcgttatctgtttatgaacagtaagacc
cttttcaaggaagtaagaaaagatggtgatttaaacaagatgaagcctgtgattgttcat
ataaattatcatccagataagttacccagaatgaaagcagtcatggagttctatttcgat
gggaagaaagatgcattggaaccgtttcctgatggctccgagtga
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