Cynara cardunculus var. scolymus (artichoke): 112510553
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Entry
112510553 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112510553 isoform X1
KO
K04485
DNA repair protein RadA/Sms
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112510553
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
112510553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
Lon_C
NACHT
AAA_22
AAA_16
AAA_19
AAA_14
nSTAND3
NTPase_1
AAA_5
RNA_helicase
SLFN-g3_helicase
AAA_29
Zn_ribbon_10
ABC_tran
DAP3
Motif
Other DBs
NCBI-GeneID:
112510553
NCBI-ProteinID:
XP_024971783
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Position
LG 3:complement(38840284..38852891)
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AA seq
591 aa
AA seq
DB search
MRAFQTLNSRTHFIDLITTKHPQFHKIYRGFHSTNHLFIEESSTVSTIYDPVSNRLVTTR
VANSKPSEGESDKDAYRSSNSDYVDALKDDRSYGSVLKANQGFGVVSKKKSKSKSTWVCS
ECGYTDGQWWGYCRECRNVNTMKEFTESDNGGKTTGFQVSEKIVKSWLPKGSGDAVPMRL
TDVNRGINQSDWRFHLSGLFGTEVSRVLGGGLVPGSLVLIGGDPGVGKSTLMLQIAAIIA
EGKEIGKPAPVLYVSGEESVEQIGNRADRMEISAEELFLYSSTDIEDILQKAQVLSPRAL
IIDSIQTVHLMGVTGSAGGIYQIKECTAALLRFAKKTNIPVFLIGHVTKSGDIAGPRALE
HIVDAVLYMEGEQYSSHRLLRAFKNRFGSTDELGVFEMSPCGLKAVTNPSEIFLSEERSD
SEFLAGLAIAVIMDGSRTFVIEIQALCAPGSSLSRQVNGVQAGRADMIISVLMKQAGLKL
QSNAIFLNVVSGLTLTETAGDLAVAAAICSSFLEFPIPNDVAFIGEVGLGGELRMVPKME
KRVSTVAKLGYKKCVVPKSAEKSLRGLDFGEIEILECINLKEVINAVFVTR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcatttcaaaccctaaactctcgtactcactttattgatctaatcaccacaaaa
catccccaattccacaaaatctatagaggttttcactccactaatcatcttttcatcgaa
gaatcatccacagtctctactatttacgatcccgttagtaaccgtcttgtgactacgcga
gtagcaaattcaaaaccctcggaaggggaatccgataaagacgcttatagatcgtctaat
tccgattatgtcgatgctctgaaagacgacagatcttacgggagtgttttgaaggcgaac
cagggttttggtgttgttagcaagaagaagagtaaaagcaagagtacttgggtttgttct
gaatgtggatacacagatggacagtggtggggatactgccgtgaatgtagaaatgttaat
acaatgaaggagttcacagaaagtgataatggaggaaagacgactggattccaagtgtct
gaaaaaatagtgaaatcgtggttaccaaaagggtcgggagatgctgttccgatgaggtta
acggatgtcaacagagggatcaaccagtcggattggcgatttcatttgtctgggctattt
ggaactgaagtttctagggttcttggcggtggtctcgtaccaggttctttggttttgatt
ggtggtgatccaggtgtcggaaagagcacattaatgttacagatagcagcaattatagct
gaagggaaagaaatcggtaaaccggctcctgtgctatatgtctcaggtgaagagagtgtc
gaacaaattggaaacagagcagatcgtatggaaatcagcgcagaggaattgttcttatat
tcaagtactgacattgaggacattctgcaaaaggctcaggttctttcacctcgtgcacta
atcattgattccatccagactgttcatctgatgggcgttactggaagcgccggaggtatt
taccagattaaagaatgcacagcagccttgctgcgtttcgctaagaagacaaacatacct
gtattcttgatcggccatgtaacgaagtcgggagacatagctggacctcgtgcgttggag
catatcgttgatgcagttttatatatggaaggggagcagtattcatctcatcgtctgctt
cgtgcatttaagaatcgttttggctccaccgatgagcttggagtgtttgaaatgtctcca
tgtggattaaaagccgtcacaaatcctagcgagatttttttaagcgaggaacgctcggat
tcggaattcctggcaggtcttgcaattgctgtgattatggatggatctcgaacatttgtc
attgaaattcaggcactatgtgcacccgggtcctcactttcacggcaagtgaacggggtt
caagcagggagagctgatatgattatatcagttcttatgaaacaagctggtctcaagctc
caatcaaatgcgatcttcttgaacgttgttagcgggcttactttaaccgaaactgctgga
gatttagcagttgcagcagcaatttgtagcagctttcttgagttcccgatccccaacgat
gtggcattcatcggtgaagttggtcttggtggcgagcttcggatggtaccgaaaatggag
aagagggtgagtacggtggcaaaactcgggtataaaaagtgcgttgtcccgaaatcggcc
gaaaagtcattacgaggattggattttggagaaatcgagatcttggagtgtattaatctg
aaagaggttattaacgctgtgtttgtaacacgttaa
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