Cynara cardunculus var. scolymus (artichoke): 112510852
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Entry
112510852 CDS
T05604
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112510852
03036 Chromosome and associated proteins [BR:
ccav03036
]
112510852
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112510852
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112510852
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112510852
microRNA pathway
RISC loading complex
112510852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArgoN
ArgoL1
Motif
Other DBs
NCBI-GeneID:
112510852
NCBI-ProteinID:
XP_024971969
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Position
LG 4:10721803..10723131
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AA seq
442 aa
AA seq
DB search
MDGCACRGRGRGRRGGGQQPPVSSQNIIGRGNVGQPSPRVAVQQTSMVRDFENLVIGSST
TTLEPVVATATVAGPIRQQPMQHLPVQTSPEAMVASQQQAAPMAPSQAVPLVPSSSRMIK
APTRNGFGTAGRKCVIRENHFLVDIGQKDPHHYDATIAPEVTSKIKCREIMKFLIESYRA
SHLGNLLLAYDGKKSAFVARALPFESKEFVVKIVENNGRECEFKVTIKFVARKDVHHLKQ
FLSGRQPDCPQETIQALDVILRESASQGRKIVGRSLFSCEFGHGALGDGIEFWKGFYQSL
RPTQMRLSLNVDMSARAFYQPTLASEFVSEFFNKDITRPLSNQERIKVKKALRGVRLEVR
RQDYMRRYKVQELSVQPQPSITQPTQKVHVDIPSSSRQAPTTDKFEEIVSQMETLRRCPP
VPRREPLMMENIHQYLYHDRDE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatggttgtgcttgtcgcggacgaggacgagggcgtcgtggtggtggacaacaaccg
ccggtttcttctcagaatattattggaagaggaaatgttggacaacccagtcctcgtgtt
gctgttcaacagacatcgatggtgagagattttgaaaatcttgtgataggttcatcgaca
acgacattagaaccggtcgttgctacggctactgtggcaggtccaattcgccaacagcca
atgcagcatcttcctgttcagacatcaccggaagcgatggtagcctcgcagcaacaggca
gcgccaatggctccttctcaggctgtaccgttggtgccttcgtcttcgaggatgattaag
gcaccaactaggaatggttttggaactgctgggagaaaatgtgttattagggaaaaccat
tttcttgttgatatcgggcaaaaggatccgcaccattacgatgcgacaattgctcctgag
gttacttcgaagattaaatgtagagaaatcatgaaatttcttatcgagtcatatcgggct
tcacacttgggaaatttgttgttggcatatgatgggaagaaaagtgcatttgttgcaagg
gcattgccttttgaatctaaagagtttgtagttaagatcgttgagaacaatgggcgggag
tgcgaattcaaagtcactataaaatttgttgccagaaaagacgttcaccatctgaagcag
tttttaagtggcaggcagcctgattgtccacaagagactatccaagctcttgacgtcata
ttgagggagtctgcttctcaaggtcgtaagatagttgggagatcattgtttagttgtgaa
tttggccacggtgcccttggtgatggaatagagttctggaaaggattttatcagagtctc
agaccaacccaaatgagactctcactcaatgtagatatgtcagcccgggcattttatcaa
ccaacgttggcttctgagtttgtatcagaatttttcaacaaagatataacaagaccactc
tcaaaccaagaacgtattaaggtgaaaaaagctttgagaggtgtcaggttggaagttcgg
cgccaggattacatgagacgctataaggttcaagaattatcagttcaaccacaaccatcc
atcacccaaccaacccagaaggtgcatgtagatattccttcttcatcgaggcaagctcca
acaacagacaaattcgaagaaatcgtctctcagatggaaacgttaaggagatgtccgcca
gtgcctcgaagggaacccttgatgatggagaatattcatcaatacctctaccacgatcgc
gatgaatag
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