Cynara cardunculus var. scolymus (artichoke): 112510867
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Entry
112510867 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112510867
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112510867
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112510867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Prok-RING_1
RINGv
zf-Nse
zf_RING_Vps8
Trypan_PARP
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
112510867
NCBI-ProteinID:
XP_024971983
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All DBs
Position
LG 4:complement(11790598..11791500)
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AA seq
300 aa
AA seq
DB search
MHHIKFSLIEIIKFRYEIKWVALVVVLLLANGCAAAEPANEPPPIAQPGQKTGTKISLPM
AVVLACLLSAFLLICFLFYLFHRYAEHQFALAATTGNGGERSLGKQVAARGLDPAVVATF
TSFTYSVVKEIMIGQQALECAVCLNGYQDHEALRLLPECSHVFHRDCLDEWLALHVTCPV
CRASLVPKPDPLSRETESWHSTKETTKGYVSIQLTELKHDLPPVRKISRSCSMGERRSKN
VERYTLRLSEEMQNVLNNLTVNPSTNSNVAFSMGSDTKLINLRSASVNSIRGSDCFNHII
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatatcaagttttcattgatagaaatcatcaaatttcgttatgaaattaaatgg
gtagctctcgttgttgtgttactcttagcaaatggttgtgccgctgcggaacccgccaac
gaaccaccgccaattgcgcagccggggcaaaaaactggtaccaagattagcctgcccatg
gcagttgtgttggcatgcttgttaagtgccttcttgttaatttgcttcttgttttacttg
ttccaccgctatgccgaacatcagtttgccctcgccgccactactggaaatggaggtgaa
aggagtcttgggaagcaggtggcggcacgtggacttgaccctgccgtggttgccaccttc
acgagttttacatactcggtcgtgaaagagatcatgattgggcaacaagcgctagaatgt
gctgtgtgcttgaatgggtaccaggatcacgaggctctacgcttgctacctgaatgcagc
catgtttttcaccgtgattgtttagatgagtggttggccttacatgtcacttgcccggtt
tgtcgggcgagtcttgttccgaaacccgatccactcagtcgcgagacagagtcatggcat
agcacaaaggagacaacaaaaggttatgtttcaattcaactcaccgaattgaaacatgac
ctcccacctgtcagaaaaatatcccgctcttgttcaatgggagaacgacgttcaaaaaat
gttgagaggtacacgttacggttatcagaagaaatgcaaaatgttctcaataacctgacc
gtcaatccatcaacaaactctaatgtggcattttccatgggaagcgatacgaaattgatc
aatctcagaagtgcaagcgtaaattcgattagggggtcggattgttttaatcatattata
taa
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