Cynara cardunculus var. scolymus (artichoke): 112510884
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Entry
112510884 CDS
T05604
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112510884
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
112510884
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DUF5128
DUF1192
Cmr1_C
DUF2071
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
112510884
NCBI-ProteinID:
XP_024972003
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Position
LG_4
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AA seq
203 aa
AA seq
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MGRGRVTLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIIFSTKGKLCEFATD
ASMERILERYERYSCAERQLTATDRESHGSWSLQHAKLKSRIELLQKTQRHIMGEDLDSL
SLKELQNLEQQLDTALKHVRLRKNQLMFESISLLQKKDKELQNQNNVLSKKAGGNGAVEE
EIPRETAQPSIVLPPWMLQHMNQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaagggtgacgttgaagaggatcgagaataaaatcaatcggcaggtgaca
ttctccaaacggaggtcaggattgttgaagaaagctcatgaaatctctgtcctctgtgat
gccgatgtcgcactcatcatcttctccaccaaaggaaaactctgcgagtttgctactgat
gcctccatggaaaggattcttgagaggtatgaaagatactcatgtgcagaaaggcagctt
actgcaactgatcgtgaatcacatggaagctggagtttgcaacatgcaaagctcaagtct
agaattgaacttttgcagaaaacacaaaggcatatcatgggagaagaccttgattccttg
agtctcaaagaacttcaaaatttggagcagcaacttgatacagctcttaaacatgttagg
ttgagaaagaaccagctgatgtttgaatcaatctctcttctccagaagaaggacaaggaa
ttgcagaatcaaaataacgttctctcaaagaaggcaggaggtaatggagcagtagaagaa
gaaatcccaagagaaactgctcaaccatcaatagtgttacccccatggatgcttcagcac
atgaaccagtaa
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