Cynara cardunculus var. scolymus (artichoke): 112510993
Help
Entry
112510993 CDS
T05604
Name
(RefSeq) protein NRT1/ PTR FAMILY 1.2-like
KO
K26551
MFS transporter, POT/PTR family, low-affinity nitrate transporter
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112510993
Transporters [BR:
ccav02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
112510993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
112510993
NCBI-ProteinID:
XP_024972115
LinkDB
All DBs
Position
LG 4:complement(19164316..19169009)
Genome browser
AA seq
592 aa
AA seq
DB search
MEVCLTEEERDVEQEKSSGLQKGGLITMPFIIANESFEKVASFGVVPNMITYLTSDYHMG
IAQGTTVLLNWMAATNLLPIVGAFLSDSFLGRFLTIFLGSIFSLLGMILLWLTTVIPGAK
PIFCDIQVPQSCKSPTFIQYTLLFSAFGFMSIGAGGVRPCSLAFGADQIDRKDNPKRERV
LESFFGWYYATAIMAVLIAFTGIVYIQEQYGWRVGFGIPVILMFFSTILFVVAYPLYYMA
KVERSMFTSFCQVILVAWKNRKLTLPSLTDGSWYNRNDTEVNTPTETLRFLNKACICKEP
EEMSKGVSKDPWSLCTVEQVEELKALIKVIPLWSSSIMLSVTMNQSTFPVLQANSMDRHI
TSSFEIPAGSFSFFSIITIMVWVVLYDRVIIPLLSKIRGKPVYISVKLRMGVGLIFSITA
MVISGIIEHTRKTKAIEEGFLNNSQAVVNMSAMWLIPQHVLNGLADALNIIGQTEFYYSE
FPKSMSSIASSLYLLGSGVASLLASFILSTVAGLTKGEGKESWISSNINKGHYDKYYWLL
AIMSSVNFFYYVVCSCTYGSCADRVVVEGAKIDNFAEEKESEVEQLSETRST
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttgtttgacagaagaagaacgagatgtggaacaggagaagtcatcaggactg
caaaagggtggtctaataaccatgccattcatcatagccaatgaatcatttgagaaagtg
gcaagttttggggtagtgccaaacatgataacatacctcacatcggattaccacatggga
atcgcccagggcacgaccgtgctcttaaactggatggctgctaccaatttattacccatc
gttggtgctttcctctctgattcctttcttggacgcttcctcactatttttcttggttct
atcttcagtctcctggggatgatccttctatggttgacgacagtgatcccaggcgcaaaa
ccgattttttgtgatatccaggtccctcagtcttgtaaatcaccgacgttcatccagtac
acgctcctcttttcagccttcggttttatgtctattggagctggtggggtaagaccgtgt
tccttagcatttggagcagatcaaatagaccgcaaagataatcccaagagagagagggta
ttagagagcttctttggctggtactacgcgaccgccattatggctgttttgattgcattt
acgggtattgtctatattcaagagcaatatggatggagagttggtttcgggatcccagta
attctcatgttcttttctacaatcctatttgtcgttgcttatcctctgtattacatggca
aaggttgaaagaagcatgtttactagcttttgccaagtgatattggtggcttggaaaaac
agaaagctcaccttaccttctctgactgatggctcatggtataatcggaatgatacggag
gttaatacccccacagagaccttgaggttcttgaataaagcttgcatctgtaaggaacct
gaagagatgagcaaaggagtttccaaagatccatggagcctctgcacagtagagcaggtt
gaagagctaaaggcgcttattaaagtgataccattatggtcttccagtatcatgttatct
gtgaccatgaaccaaagtacatttccagtcctccaagctaacagcatggatagacatatc
acttcaagctttgaaatcccagcaggctccttttccttcttctcaataataaccataatg
gtttgggttgtactatatgaccgagtgatcatccccttattgtcaaaaatcagagggaaa
ccggtatatatcagtgtaaaactaagaatgggggttggtcttattttctcaataacagcc
atggtgatttctgggatcatagaacacacgcggaaaaccaaagcaattgaagaaggattt
ttgaacaactctcaggcggtggtaaatatgtcggctatgtggcttattccacagcatgtc
ctcaatggattagcagatgctttgaacattataggccaaacggagttctactattctgaa
ttcccaaagagtatgtcgagtattgcatcttctctttacttgcttgggtccggtgtggca
agcttgttggctagttttatcctaagcactgtggctggtcttaccaaaggggagggaaaa
gagagttggatttctagcaatataaacaagggtcactatgataagtactattggcttctt
gctataatgagttctgtaaatttcttttattatgtcgtgtgtagttgcacttatggttct
tgtgcagatagagtggttgtagagggtgcgaaaattgataatttcgcagaagaaaaggaa
tcagaagttgagcaattatctgagacaagatctacatag
DBGET
integrated database retrieval system
