Cynara cardunculus var. scolymus (artichoke): 112511020
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Entry
112511020 CDS
T05604
Name
(RefSeq) metal transporter Nramp2-like
KO
K21398
natural resistance-associated macrophage protein 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112511020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112511020
Transporters [BR:
ccav02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
112511020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
112511020
NCBI-ProteinID:
XP_024972147
LinkDB
All DBs
Position
LG 4:15520711..15526246
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AA seq
545 aa
AA seq
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MMHESPHDQHNTESKSEGDEEDHHLLLISQSPLPLSTDNNPKDNYVSDEEEVAYESHDKI
VIDGLDSDSDNTDFNSTPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLL
WLLMWATGMGLLIQLLSARVGVATGRHLSELCREEYPRWAGLLLWFMAEIALIGADIQEV
IGSAIAIQILSNGILPLWAGVVITASDCFMFLLLENYGVRNLEAVFAVLISTMGLSFAWM
FADAQPSGKELLIGLLVPKLSSRTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPNKKGR
VQEAINYYTIESSIALFVSFMINLFVTTVFAKGFYGTKQADSIGLVNAGQYLEQKYGGGF
MPVLYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTMIVAL
VFNKSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSKEEVMGVFKIGPTLERIAWSVAAL
VMVINGYLLLDFFVAEVNGFLFGALAVTSTSAYVVFILYLISHGDCLPSTWFSHIVNKGY
SYIGK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgagtctcctcacgaccaacacaatacagaatcaaaatctgaaggagacgaa
gaagatcaccatctcctgctgatatcccaatctcccctccccttatccaccgacaacaat
cctaaagataattacgtctccgacgaggaagaggttgcctatgaatctcatgataaaatt
gtaatcgacggattagattcagattccgataatactgatttcaactccacgccacccttc
tcgtggaagaagctatggttatttacggggccagggtttctaatgagcatagcgtttcta
gatccgggaaacctagaaggggatcttcaggctggtgccattgctggctattctctattg
tggttgttgatgtgggcgacgggtatgggtctcctgatccagctgttgtccgctcgggtt
ggggtggctaccggccggcacttatcggagctatgtagagaggaataccctaggtgggct
ggattgctgttgtggttcatggctgagatagcgttgattggagctgacattcaagaagtg
attggcagtgccattgctatacagattcttagcaatgggattcttcctctttgggctggg
gtcgtgatcactgcttctgattgtttcatgtttttacttcttgagaactatggagtgagg
aatttggaagctgtttttgcagttctcatctcaactatgggactatcatttgcatggatg
tttgctgatgcacaacctagtggaaaagaacttctaataggtcttttggttccaaagctc
agctcaagaacaattaggcaagctgttggagtagtagggtgcgttataatgccccacaat
gtattcttacattctgctttggtgcaatcgaggaaaattgatccaaacaagaaaggcagg
gtccaagaagcaattaattactacacaatcgagtcttcgattgccctttttgtttctttt
atgatcaatttatttgtgactaccgtctttgctaagggattttatggtaccaagcaagcc
gatagtataggccttgtaaatgctgggcagtatcttgaacagaagtacggtggcggattt
atgccggttctgtatatctggggtattggcttattggcagctggtcaaagtagcaccatc
acgggtacttacgctggtcagtttatcatgggaggcttccttaaccttcgtctaaaaaaa
tggctgagggcattgataactagaagttgtgcaattgtgccgaccatgattgtagctctt
gtatttaacaaatcggaagcttcattggatgtattaaatgaatggcttaatgttcttcag
tccatccagatcccgtttgcacttatcccacttttaaccttggtgtcgaaagaggaagtt
atgggggtcttcaaaattggacctactctagagagaattgcgtggagtgtggctgcacta
gtgatggtgatcaacgggtacctactgcttgatttcttcgtggctgaggtgaacggattt
ttgtttggcgctttggctgtaaccagcacttctgcatacgtggtatttatattatatctc
atatctcatggagattgcctaccatctacatggtttagccacatagtcaataaagggtat
tcctatattggaaaatga
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