Cynara cardunculus var. scolymus (artichoke): 112511029
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Entry
112511029 CDS
T05604
Name
(RefSeq) floral homeotic protein PMADS 2 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112511029
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
112511029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
KH_PNO1_2nd
DivIC
bZIP_1
YabA
DUF3450
Atg11_middle
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
112511029
NCBI-ProteinID:
XP_024972162
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All DBs
Position
LG 4:complement(8651640..8654505)
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AA seq
211 aa
AA seq
DB search
MGRGKIEIKRIENTSNRQVTYSKRKNGIIKKAKEITVLCDANVSLVIYGSSGKMYEYCSP
KTNLIDMLDRYQRLSGNKLWDAKHENLQNEIDRIKKENESMQIELRHLKGEDITSLNYEE
LIAYEDALENGLTNIRDKKDEIPKMMRKHEQVLEEENKHLMYLLKVKGDSSENRHKSWWQ
QSEMAAMGDYQAHEPFSFRVQPMQPNLHERM
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaaagatagagatcaagaggatagagaacactagcaacaggcaagtcacc
tactccaagagaaagaatggtatcatcaagaaagctaaggaaatcactgttctttgtgat
gctaatgtgtctcttgtcatctatggttcttctggcaagatgtatgagtactgtagcccc
aaaaccaacttgattgacatgctggatcgatatcaaaggctttctggaaataagttgtgg
gatgccaaacatgagaatttgcagaatgaaattgatagaatcaagaaagagaatgaaagc
atgcaaattgagcttaggcacttgaaaggagaagacataacatctttgaactatgaagaa
ctaattgcctacgaagatgcacttgaaaatggactcaccaatattcgtgacaaaaaggat
gaaatccccaaaatgatgaggaaacatgaacaagttctggaggaggagaataagcacctt
atgtatttgctaaaggtaaagggtgattcgtcagaaaaccgtcacaaaagttggtggcaa
caaagtgaaatggcagccatgggagattaccaagctcatgaaccattctcatttcgtgtc
caaccgatgcagccaaacttgcatgagaggatgtaa
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