Cynara cardunculus var. scolymus (artichoke): 112511034
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Entry
112511034 CDS
T05604
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 8-like
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112511034
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112511034
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GFIT
Motif
Pfam:
MULE
FAR1
ZSWIM1-3_RNaseH-like
SWIM
Transposase_mut
ZSWIM3_N
Motif
Other DBs
NCBI-GeneID:
112511034
NCBI-ProteinID:
XP_024972172
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Position
LG 4:18578638..18582585
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AA seq
747 aa
AA seq
DB search
MEDGSDKSEELLEDDGGDHDIDSEQVFAIGNNDVETESLFGIEGDDLENGSELVLDIESH
EQENDSEQILEFENNDLEDKDQMIEFRSNNHNTDGAQMLEIGNNNQDDASISDDQQDPSE
SKHNPPPVVGMEFESYEDAYKYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGF
KTLKEASSRRKETRTGCLAMIRLRLVESSRWRVDEVKLEHNHLFDPERAQNSKSHKRTDS
GVKRKLEPTVDVEVRTIKLYRTPIVDAICYGSSNERDFDNEFGKSKRLNLNKGDAQVIHD
YFCRVQLINPNFFYIMDFTDDGYVRNVFWIDSRARASYGYFGDVVSLDTTCLTSKYIVPL
VVFVGVNHHGQTISLGCALLADESQETYTWLLRAWLTCMWGRPPQTIITDPSMTLQSAIA
EIFPRAHHRLCLPLVVERILESLANLESEVLPTVLNSIIYNSIKVEEFEVAWDDMIQRFA
IRDNEYLRKLFEDRERWAPVYSKDTYFAGMFTFQPGESTVPFFHGYVHQQTSLKEFFEMH
DLVLQNKIQKEAFDDCESRDSNPKLRTICTYESQLSKVYTKQIFSLFQYEVEMMSNCFNI
SQVNTSGLIVTYMITEQETEGNSIRNLEVMFDKIGLEIRCICSCFNFKGYLCRHALSVLN
HNGIDEIPSQYILSRWRKDFKRLYVPDLGSDNVDVSSPVQWFVHLHKQALQVVEEGMTSQ
EHYMVAWQAFKESLNKVRLVSDKQAQS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggttctgataaaagtgaagagctgcttgaggatgatggtggtgatcatgac
atagacagtgagcaagtatttgcgattggaaacaatgatgtggagaccgaatcattgttt
gggatcgaaggtgatgacttggagaatggcagtgagctagtcctcgacattgaaagccac
gaacaagaaaacgacagtgagcaaatcctcgagtttgaaaataatgatcttgaagataag
gaccaaatgatcgagtttagaagcaacaaccacaatactgatggtgcccaaatgcttgaa
attggaaataacaatcaggatgatgcatcaatatccgatgatcaacaagatccctccgag
agcaagcacaatcctccaccagttgtgggaatggaatttgagtcatatgaagatgcttac
aagtactataattgttatgctaaagaactcggattcgccattagggtcaaatcttcgtgg
acaaagcgtaacagcaaagagaaacgaggtgcggttctctgttgcaattgtgagggattc
aagaccttgaaagaagcaagtagtagaagaaaggaaacaagaacaggttgtttagcaatg
ataagattgagattggtggaatcgagtagatggcgggttgatgaagttaagcttgaacac
aaccatttgtttgatcccgaaagagcccaaaactccaaatcacacaaaagaaccgactct
ggagtaaaacggaaattggagccgaccgttgatgtggaggtgcgaacgattaagctgtat
cgaacccccattgtagatgcaatatgttacggaagctcaaatgaacgagactttgataac
gagtttgggaaaagcaaacgtttaaacctgaacaagggggatgcacaagttatccatgat
tatttttgtcgggtccagctaataaacccgaacttcttttatatcatggatttcaccgat
gatggttatgtaaggaatgtcttttggatcgattccagggcacgggcttcatacgggtat
tttggagatgtggtttctctcgatacaacgtgtttgactagcaaatatatcgttccgttg
gtggtctttgtcggggtgaatcaccatgggcagactatttcactcggctgtgctttgctc
gctgacgaaagtcaagaaacgtatacttggttattgagagcatggttgacttgtatgtgg
ggacgtcctccacaaaccataatcacggacccgagtatgaccctgcagagtgcaatcgcc
gagattttccctcgggcccaccatcgcctttgtttgcctctcgttgtcgaaagaattctt
gaaagcttggcgaatttagagtcggaagtattaccaacagtactgaatagcataatctac
aactcgataaaagtagaggagtttgaagtagcttgggatgatatgatccaacgttttgca
atcagagacaacgaatatctacggaaattgttcgaagatcgagagcggtgggccccagtt
tactcgaaagacacgtactttgctgggatgttcacttttcagccaggtgagtccacagtt
cccttttttcatgggtacgtccaccaacaaacttctttgaaagaatttttcgagatgcat
gatttagttctccaaaacaagatccaaaaggaagcatttgatgattgtgaatcaagagac
tcgaaccctaagttaagaacaatatgcacatatgaatcacagctttccaaagtatacaca
aagcagatattctcacttttccaatatgaagtagagatgatgtccaattgctttaatata
tcacaagtgaatactagtggcttgatcgtcacatacatgatcaccgagcaagaaaccgag
ggaaattccataagaaatcttgaagtaatgttcgataaaataggattagagatcagatgc
atctgcagctgtttcaacttcaaaggttacctatgtagacatgcgttatccgtacttaac
cataatggcatagatgaaatcccgagccaatatattctttcgagatggaggaaagatttt
aagcgattgtacgtacccgatcttggctcggataacgtggatgtcagtagcccggttcag
tggttcgtgcatttgcataaacaagcgttacaagtcgttgaggaagggatgacgtctcaa
gaacattatatggttgcttggcaagcgttcaaagagtcgttgaacaaggttcggttagtc
tccgacaaacaggctcaaagttaa
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