Cynara cardunculus var. scolymus (artichoke): 112511041
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Entry
112511041 CDS
T05604
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112511041
Chaperones and folding catalysts [BR:
ccav03110
]
Heat shock proteins
HSP100
112511041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
AAA_28
AAA_14
NBD_SMAX1
NACHT
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
112511041
NCBI-ProteinID:
XP_024972178
LinkDB
All DBs
Position
LG 4:16912566..16919500
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AA seq
923 aa
AA seq
DB search
MAGALVQSTSFPSTVAGESKVRPKRSGNTKGEVKMMYSLQTPPMRVMTFSGLRGTNALDN
LVKRGQDFHSKVAAATSVRRAKPSRIVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPNNIRTQVIRMVGESAEAVG
AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLP
DKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKTQISALVDKNKEMSKAETEAGEEGPTVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHTRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEI
ELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKDGDSVIVDVDSD
GNVTVLNGSNGAPPEALPEPMEV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctggggctctggttcagtctaccagttttccttcaacggttgctggtgaaagcaag
gttcgtccaaagagatctggtaatacgaaaggagaagtcaaaatgatgtatagtttacaa
actcctccaatgagggtgatgactttctctggtttgcgaggaaccaatgctttagacaac
ctggtaaagaggggtcaagatttccattcaaaggttgcagctgccacctctgtacgacga
gcaaaaccttctcgaattgtgccaaaagccatgtttgagcgcttcacggagaaagctatc
aaagttatcatgcttgcacaagaggaagcaagacggcttggtcacaactttgtgggtact
gagcagatcttattaggtcttattggtgagggcactggcattgcagcaaaagttctgaag
tcaatggggattaatttgaaagatgcacgcgtggaagtagagaagattattggtagggga
agtggatttgttgctgtagagattccattcacacctcgtgcaaagcgtgttttggaactg
tcattagaggaggcacggcaacttggtcataactatatcggatccgagcacttgctcctt
ggtttgcttcgggagggtgaaggcgtagcagctcgtgttcttgagaatttaggtgcagac
ccaaataacattcgcactcaggttatcagaatggttggtgagagtgcagaagctgtgggt
gctggagtcggtggtgggagctctggcaacaagatgccaacacttgaggaatatggcacc
aacttgacaaagctagcagaggagggtaagctggatcctgttgtgggaaggcagccacaa
atcgaaagagttactcaaattctgggccggcgtacaaaaaacaacccttgtcttattggt
gaacctggcgttgggaagacggctattgcagaaggccttgcccagagaattgcgaccggt
gatgttccagaaacgatagaggggaagaaggtgataactctagatatgggtcttcttgtg
gctggcacaaagtatcgtggagagtttgaggagagactaaagaaactgatggaggaaatt
aaacaaagtgatgagattattctgttcattgatgaggtccacacgctaattggagccgga
gcagcagagggggctattgatgccgccaatatcttgaagccagctcttgctagaggtgaa
ttgcagtgtattggtgcaacaacacttgacgagtaccggaaacatattgagaaagaccca
gcgttggagagacgattccagcctgtaaaagtacccgagccaacagttgatgagacgata
cagattttgaaggggctccgtgagcgttatgaaattcaccataagctccgttacactgat
gaagcattagttgctgcagctcagttgtcataccaatacataagcgaccgtttccttccc
gacaaagcaattgatttggtcgatgaagctggttcacgtgttcggcttcgccatgcacaa
cttccggaggaagcccgagagcttgaaaaagagcttcgacaaataaccaaagagaaaaat
gaagcagttcgtggccaagatttcgagaaggctggagagttgcgggatagagaaatggat
cttaagactcagatatcggcactcgtggataaaaacaaagagatgagcaaggcagagacc
gaggccggggaggaaggtcctaccgtaaccgaggtagacattcagcatatcgtttcttcc
tggactggcataccggtcgagaaagtctccaccgatgaatccgatcgcctactcaaaatg
gaagagactctccacacgagagttgttggtcaggatgaagccgtcaaagccataagccga
gccatccgccgtgctcgtgttggactaaagaaccccaaccgtccaattgccagctttatt
ttctcgggacccaccggtgttggaaagtctgagcttgccaaagcgttagctgcatactac
ttcggatcggaagaagccatgatccggctcgatatgagtgagttcatggagagacacact
gtctcaaaactcatcggttcacctcctggatacgttggctacaccgaaggcggtcaatta
accgaggcggttcgtcgccgtccatacactgttgtcctctttgatgaaatagagaaggca
caccccgatgtcttcaacatgatgcttcagattcttgaagacggaagattgaccgacagc
aaaggaagaaccgttgatttcaagaacacgcttcttatcatgacatcaaacgtcggaagt
agtgtaatcgagaagggtggccgaaggattgggttcgacctcgactatgacgagaaggac
agcagctacaaccgaatcaagagcctggtcaccgaggaactgaaacaatatttccgcccg
gaattcttgaacagactcgacgagatgatcgtattccgacagttgaccaaacttgaggtc
aaagaaatcgctgacataatgttgaaggaagtctttgagaggctaaaggttaaagaaatc
gagcttcaagtaaccgagcgattcagggatcgggtcgtggaggaaggatacaacccgagc
tacggtgcaaggccgctgagacgtgcaatcatgaggctactggaagacagcatggcggag
aagatgctagcacgggaaatcaaggatggcgattcggtaattgttgacgttgattccgac
ggaaatgtgacggtgctcaacggtagcaacggagctccgccggaggcgttgccggaacca
atggaggtgtaa
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