Cynara cardunculus var. scolymus (artichoke): 112511045
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Entry
112511045 CDS
T05604
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112511045
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112511045
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
112511045
DNA replication proteins [BR:
ccav03032
]
Prokaryotic type
DNA Topoisomerases
112511045
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
112511045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Syntaxin-18_N
RNAseD_HRDC_C
DUF2887
Motif
Other DBs
NCBI-GeneID:
112511045
NCBI-ProteinID:
XP_024972187
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All DBs
Position
LG 1:complement(21054557..21078569)
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AA seq
941 aa
AA seq
DB search
MKPSCSISNNPSMAFATGFRFIRCYNQLSLPIYPARLSRHKCSVDGLRFLSATHRPTRLT
SVSSKSSATEGVEEGGESGNGGLMTVATSSDGDARNGRIVLTELHKEATEAYMSYAMSVL
LGRALPDVRDGLKPVHRRILYALHELGLSSRKPHKKCARVVGEVLGKFHPHGDTAVYDSL
VRMAQDFSLRCPLVSGHGNFGSVDGDNPAAMRYTECRLEALAETMLLSDLDQDTVDFVPN
FDSSLKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPDATLQEL
MEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVIVRGKTEIELSDSRTKSAAIVVKEIPYQ
TNKASLVMKIADLIQNKTLEGISDIRDESDRSGMRIVIELKRGSDPSIVLNNLYRMTALQ
SGFSCNMVGILDGQPKQMGLKELLQAFLDFRCMVVERRAKFKLAHARDRYHIVEGIIVGL
DNIDDVIDVIRKATSNSMAAADLRRKFNLSEKQAEAILDINLRRLTLLERSKFINEGKTL
MEQISNLEELLSSRRQILQLIEQEATEIKNKFSTPRRSTLEDANDGMLDEIDVIPNEEML
LAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDTMSDFLVCRAHDLLLYFSDKGIVY
SARAYKIPECSRAAAGTPLIQILSLSDGERITSIVPVSEFAEDQYLLMLTANGYIKKASL
MYFSSIRPSGIIALQLVPGDELKWVRHCTNKDAVAMASQNGMVILSSCETIRALGRNTRG
GVAMRLREGDRMACVDIIPAATHDESVSEAHHSHKGAHGPWLLFVSENGVGKRVPLSEFR
ESRLNRVGLIGCKFYSEDRLAAVFVVGFTSAEDGESDEQIVLVSQSGTVNRIKVRDIPIM
KRFARGVILMRLEHAGKIQSASLISASETEVDEVEAATVVV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttcctgctccatatccaacaatccttcaatggcattcgccaccggctttcga
tttatccgatgttacaaccagttgtctttacccatatatcctgcccgattatcgaggcac
aaatgcagcgttgatggcctgcggtttctttcggccactcaccgtcctacccgtctgaca
tcggtgagttccaaaagttctgcgaccgagggtgtcgaggaagggggagaaagcggaaat
gggggtttaatgacggtagctacaagcagtgatggtgacgcaaggaatggaaggattgtt
ctcacggagcttcataaagaggctactgaagcatacatgtcttatgctatgtcggttttg
cttggacgagcattgccagatgttcgtgatggactgaagcctgttcaccgccgtatatta
tacgcgttgcatgaattgggtctttcatcacgtaaacctcacaagaaatgtgctagagtt
gttggagaggtgcttggcaagtttcacccacatggtgatactgctgtatatgattcactg
gtccggatggcacaggatttttcgttgcgttgtccactagttagtggtcatggtaatttt
ggttcagtggatggggataatcctgcggcgatgcggtacacagaatgcagattggaagca
cttgctgaaacaatgcttctgtcagatttggatcaggatacggttgattttgtcccgaac
tttgacagttctctaaaagaaccatcattgcttcctgcgcggatcccaaacttgttactt
aatggttcttcaggaattgcggttgggatggcaaccaatattcctccacataatcttggg
gagttggttgatgctctttgtgtgttaattcataatccagatgccacgctgcaagaattg
atggaatacatgcctggacctgactttccaacaggaggaatcataatgggaaatcttggc
atcttggaggcctatcgaactggaagaggacgtgttatagtcagaggaaagacagagatt
gagttatctgattccagaacaaagagtgcagcaattgtagtaaaagagattccttatcag
accaacaaagcctctcttgttatgaaaattgctgatctaattcagaacaagactttggaa
ggcataagtgatattcgtgatgagagtgaccggtctggaatgcggatagtcattgagctt
aagagaggatctgatccatccatcgttctgaataatctatatcgcatgactgctctacag
tcgggttttagctgcaacatggttggtattctcgatggacaacctaaacaaatgggatta
aaggagttgcttcaggccttcttggattttagatgcatggtggttgaaagacgggcaaag
tttaagcttgcacatgcacgagacagatatcatattgttgagggtatcatagttgggctc
gacaatattgatgatgtaattgatgtaatcagaaaagctacaagcaattcaatggcagcc
gctgatctgaggagaaagtttaatttgtctgaaaaacaagctgaagcgatattagatatt
aacttacggagacttacattacttgagagaagtaagttcattaacgaaggaaaaaccttg
atggaacaaatttctaacttggaggaacttttatcaagcagaaggcaaatattgcagtta
attgaacaagaagcaactgagataaagaataagttctccactccacgacgttccactttg
gaggatgctaatgatggcatgcttgatgaaatagatgttattcccaacgaagaaatgcta
ttggcaattagtgaaaaaggttatgtcaaaaggatgaagccggacactttcaatctacaa
aaccgtggaaccattggtaaatcggttggaaaactgagagtcaatgacacaatgtcagac
ttccttgtttgtcgtgctcatgacctcctcctatacttcagtgacaagggtatagtgtat
tctgctcgggcctacaaaattccggaatgttcccgtgcagctgcaggtacacccctgatc
cagattttgtccctatcggatggtgaacggattacttctattgttcctgtgagtgaattt
gctgaagatcagtatcttctgatgcttaccgcaaatggctacattaaaaaagcatctttg
atgtacttttcatctattaggccgtcagggatcatagcacttcaactggtacccggtgat
gaactcaaatgggtccgccattgcacaaataaagatgctgttgcaatggcttcacaaaat
ggaatggttattcttagttcttgtgagacgatccgagcacttggaagaaatactcgaggt
ggggttgcaatgagattgagagaaggggatagaatggcatgtgtggatattatacctgca
gcaacgcatgatgagagcgtgtctgaagctcaccatagccataagggagcacatgggcca
tggctgttatttgtgtccgagaatggtgtaggaaagcgagttcctctgagtgagttccgc
gagtctcgtttgaatagggttggtttaatagggtgcaagttttattcggaagaccgtctt
gcagcagtttttgtggttggttttacctcagcagaggatggtgaaagtgatgaacaaata
gttcttgtgagtcagagtggtacggtgaaccgaataaaagtgagggatattcctattatg
aaacggtttgcaaggggagtgatattgatgaggcttgagcatgctgggaagattcaatca
gcttctttaatctccgcttcagaaacagaggtcgatgaagtcgaagctgctactgttgtc
gtatag
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