Cynara cardunculus var. scolymus (artichoke): 112511069
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Entry
112511069 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112511069
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112511069
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112511069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
112511069
NCBI-ProteinID:
XP_024972230
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Position
LG 4:16616392..16626109
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AA seq
396 aa
AA seq
DB search
MAIRGIHFKWYDGFFLSMLAFSIVMVLLSWKRYYLCKFPLHLWIVVDYGVVFVFRLLMFV
DNALAAGMGLDYGRQQRDACFLGRVVILSILYVVLYPFLWAWSIMGSVWFTSAQTCLPEK
NQKWGFLVWLIFSYCGLICLAGYVVNKWLTRRKAHLQRAQQGIPISGISEYGVLVDMIRL
PDWVFETAAQEMRAMEQDTTPHHPGLYLSSAQRQALEALIQELPLFSLKAVPTDCSDCPI
CLEEFHVGDGVRGLPCAHNFHVACIDKWLMLNTKCPRCRCSVFPNLELNDLPNIPPDPDR
SSTLSTTQHAQTQPISQSYLSRMQSFLLPIRSGNATSSTSTAATATAATAATTTFNSSTN
SEPSIDNDSDVTLEIAENGGQASESHDPHTSVERVQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcagaggcatacacttcaagtggtacgatggattttttctatcaatgcttgcg
tttagtatagtcatggttcttttgagttggaagcgctactatctttgtaaattcccgttg
catctgtggatagtggttgattacggtgttgtctttgtttttcgcctcttgatgtttgta
gacaatgctcttgcagctggaatgggattggattatggtcggcagcaaagagatgcttgt
tttcttggaagagtagtgattctatccatcctctatgttgtgctctatccatttctctgg
gcatggagtattatgggaagtgtatggttcactagtgcgcaaacctgtttgcctgaaaag
aatcagaaatggggttttcttgtatggttgattttcagctactgtggactcatttgtctt
gctggctatgtagtgaataagtggttaacaagaagaaaagctcatttgcaacgtgcccaa
caggggatccctatttccggtatttccgaatatggggtgttggtagacatgattcgtcta
ccagattgggtgtttgaaactgctgctcaagagatgagagccatggaacaagataccacc
ccacatcatcccggactttacttatctagcgcccagaggcaagcattggaggcattaatt
caggaacttccattgttctcgctgaaagctgttccaactgactgtagcgactgtccgatt
tgtttggaggagttccatgtcggggatggggttcgtggcttgccttgtgctcataacttc
catgtggcatgcatcgataaatggcttatgttaaacacaaaatgccctcgatgccggtgt
tccgtctttcccaaccttgaactaaacgatctgcctaacatcccgcctgatcccgaccgt
tcatcaactctctcaacaacacaacacgctcaaactcaacctattagccagagttacctt
tcgagaatgcagagttttctcctcccaatccgctcagggaatgcaacatcctccaccagc
accgccgccaccgccactgccgccaccgccgccaccaccaccttcaactccagcaccaat
tccgaacccagcatcgataatgattctgatgtcactttggaaatcgcggaaaatggaggc
caagcatccgagagtcacgatccacacacaagtgtagagcgtgtacaatga
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