Cynara cardunculus var. scolymus (artichoke): 112511080
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Entry
112511080 CDS
T05604
Name
(RefSeq) ribosome maturation protein SBDS isoform X1
KO
K14574
ribosome maturation protein SDO1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112511080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112511080
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
112511080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
HTH_70
Motif
Other DBs
NCBI-GeneID:
112511080
NCBI-ProteinID:
XP_024972253
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Position
LG_4
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AA seq
355 aa
AA seq
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MSRTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVERDLDEVLQSHTVYT
NVGKGVLAKSKDLLAAFGMDDQTKICLEILEKGELQVAGKERESQLSNQFRDIATIVMLK
TINPETQRPYTISMIERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTL
PQQNFDSLAEKLTEWKTVTVSKDESGSQVSIVCEMDPGLFRDCDAFVRNLQGRSEILAIS
VHGEGDIHADHYEGHEEVSSSESKKPTEDVVQLSEKIQKQTLSADDTQGQVKQNKCSTCD
AIVGDAKQYREHFKSDWHKHNLKRKTRQLPPLSADECRADEEMSDSKSDLNEYSF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggacgttggtgcagccggtagggcagaaacgactcacgaacgtagccgttgtt
cgtctcaagaaacatggaaaccgattcgaaattgcttgttacaagaacaaagtcctctca
tggcgctctggcgttgagagagatctggatgaagtgttacaatcacacaccgtttacaca
aatgttgggaagggagttcttgcaaagtctaaagatctactggcggcttttgggatggat
gatcagacaaaaatctgtctggagattttggagaaaggagaactgcaagttgcaggaaag
gagagagaatcacaattatcaaatcagtttagggacattgcaactattgttatgctgaag
actatcaatcctgaaacgcagcgcccatatactataagcatgattgagcgtttgatgcat
gaaattcactttgctgtagatccacatagcaattcaaagaaacaggcattagatgtcatc
cgggaacttcagaagcatttcccaataaagaggtctccaatgagactaagattaacgtta
ccacaacagaactttgattctcttgcagagaaactcactgagtggaaaaccgtcactgtt
tccaaagatgaatctggaagtcaggtctctattgtatgtgaaatggacccaggattattc
cgcgattgtgatgcgtttgtgaggaatctgcaagggaggtctgaaattctagcaatctcg
gtacatggtgaaggtgatatccatgccgatcattatgagggtcatgaggaagtatcgtca
agcgaatctaaaaaaccgacagaagacgttgtccagttgagcgagaaaatacaaaagcag
actttgtctgccgatgacactcaaggtcaggtgaagcaaaacaagtgcagtacgtgtgat
gcaattgtgggggatgctaaacagtatagagaacacttcaagagtgattggcacaagcat
aacttgaagcgaaaaacaaggcaattgcctcccctttctgccgacgaatgcagggctgat
gaggaaatgagcgactcgaaatcagatctgaatgaatactccttttaa
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