Cynara cardunculus var. scolymus (artichoke): 112511111
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Entry
112511111 CDS
T05604
Name
(RefSeq) auxin response factor 4-like
KO
K14486
auxin response factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112511111
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112511111
NCBI-ProteinID:
XP_024972323
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Position
LG 1:complement(9981304..9986105)
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AA seq
790 aa
AA seq
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MEIDLNHAVSGHNAESCGNEGDSSLSISSNSSNSSLKSPISNPSASIYMELWHACAGPLT
TLPNKGNVVVYFPQGHLEQIASHSSTHFSPIEVPSLGLPPLIFCKIVDVQLLANKENDEV
YTKLILLPLPEGNLQESEEEGGGVAPVRSTPQMFCKTLTASDTSTHGGFSVPRRAAEDCF
PPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLF
LRGEGGELRLGTRRATRPRNVLPDTTMGNLNSYSEILASVANAVSTNTTFHVFYSPRSSR
ADFVVPYTKYVKSISNMISMGARFKMKFCMDESPERRFSGVVTGVGDMDPYKWPNSKWRC
LMVRWDEDIGNDHQERISPWEIDLSGGAFPLLSIQSSPRLKKLRAGLHATPSGHPATARG
GYVDFEESVVRSSKVLQGQENVGPVSPLYGRDKMNSLSFGVQPSMHPSFPPNGMMMARST
NFVGEIMRSTHHQPLPATPYSGFLESDNARFPKVLQGQEICSLRSLTGKPNIGSWGPPRT
DVGNGRRNVLNMYRSPENPGFYPLGSEGGRNFGFPNTGVCEARPNPGPAMPTNFTRFPIV
PPSIGNGIMRDNVGELQVPVEKIVGATIEPNSSSEKDDGASDSIESSCKLFGFPLNEVAP
LVDAKSLNKRSCTKVHKQGNKVGRAIDLSKMSSYGELFLELESLFNMEGMFSNPNGGWRL
LYTDEENDMMVVGDDPWDEFARMATKIHIYSAEEVEKLMSSGVISDNTSCLEEAPAVVDT
AKSSSVGHPD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatctgaatcatgcagtgagtggtcacaatgctgaatcttgtgggaatgaa
ggggattcatcactatcaatttcatcaaactcctcaaattcttccttaaagtccccaatt
tcaaacccttctgcctcaatttacatggaactctggcatgcttgtgctggccctcttacc
actctcccaaataaaggaaatgtggttgtttacttccctcaaggtcacttggaacaaatt
gcctcacactcatccactcacttttcacccattgaagttccctctttgggactccctcct
ctgattttttgcaaaattgttgatgttcaattgcttgcaaacaaggagaacgatgaggtc
tacacaaagctcattcttttgcctctgccagagggaaatttgcaagaaagtgaggaggag
ggtgggggggttgcacccgtaagatcaacccctcaaatgttctgcaaaacactcactgct
tctgacacatccacccatggcggattctcggttcctcgacgagctgctgaagattgtttc
ccacctctggattataagcagcagaggcccagccaagaactaattgctaaggatctccat
ggagtagaatggaaatttaggcatatttatagaggtcagcctaggcggcatttgcttacg
acaggttggagcatctttgtaagccaaaaaaatcttgtttcaggggatgcagttctcttt
ttgaggggggaaggaggagaactgagactaggaactcgaagagctactcgaccaagaaac
gtccttcctgatacaaccatgggaaacttgaattcttattccgaaattcttgcttctgtc
gctaatgcagtgtcaaccaacaccacttttcatgttttctacagtccaaggtctagtcgg
gcggattttgttgttccttatacaaagtacgtgaaatcaattagtaatatgatatctatg
ggtgcaagattcaaaatgaaattctgtatggatgagtctcctgaacgaaggttcagtgga
gttgtgacgggtgtaggtgatatggatccttacaaatggcccaactcaaaatggagatgc
ctaatggtgaggtgggacgaagatattggaaatgatcatcaagaacgaatatctccatgg
gagattgatctttctggtggggcttttccattgttaagcattcagtcctccccacgactc
aagaaactgcgtgcaggtctgcatgcaactccttctggtcaccctgcaactgcacggggt
ggatatgtagactttgaggagtctgtcgtaagatcctctaaggtcttgcaaggtcaagaa
aatgtaggtccggtatcacctctgtatgggcgtgataagatgaactcgttgagctttggg
gtacaaccctcgatgcatccgagttttcccccaaatgggatgatgatggcaaggagtaca
aattttgttggtgaaattatgaggagtactcatcatcagccactcccagccaccccttac
tcgggctttctggaatctgataatgctagattcccgaaggtcttgcaaggtcaagaaatt
tgctcgttgagatcattgaccggaaaacccaacatcggttcttggggcccaccaagaacc
gatgttggtaatggccgtcgcaatgttctcaacatgtatagaagccctgagaatcccggt
ttctatccacttggttctgaaggtggcagaaactttgggtttccaaatactggtgtttgt
gaagcaagaccgaatccaggtccagccatgcctacaaacttcacgcgatttcccatcgtt
ccaccttccattggaaatgggatcatgagggataatgtgggcgagcttcaggttcccgta
gagaaaattgtcggtgcgacgattgaaccaaattcaagcagcgaaaaagatgacggtgct
tcagatagcatagagagcagctgtaaactctttggttttccattgaatgaagttgctcca
ttggtagatgctaaaagtttaaacaagaggagttgtaccaaggttcacaagcaaggaaac
aaggttggaagggcgattgatctgtcaaaaatgtcaagttacggtgagttgttcttggag
ctggaatcattgtttaacatggaaggcatgttcagtaatccaaatggtggatggcgacta
ctgtataccgatgaagagaatgacatgatggttgtgggggatgatccatgggacgagttt
gcaaggatggctacaaagatacacatatacagtgcagaagaagtggaaaagctgatgagc
agtggggtgatcagtgacaacacaagctgcttggaggaggcaccggctgtagtcgataca
gctaagtcttcatcagtcggtcatccggattaa
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