Cynara cardunculus var. scolymus (artichoke): 112511164
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Entry
112511164 CDS
T05604
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112511164
03041 Spliceosome [BR:
ccav03041
]
112511164
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112511164
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112511164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_N4BP1_1st
KH_PNO1_2nd
KH_BICC1_1st
Motif
Other DBs
NCBI-GeneID:
112511164
NCBI-ProteinID:
XP_024972416
LinkDB
All DBs
Position
LG 4:complement(16083783..16091548)
Genome browser
AA seq
746 aa
AA seq
DB search
MADEEVMGSASPAPSDHKRKLDDLDSEPFEQPPVSADSNGNSQSVADADGDAAPTDISPE
DPDVKRPRLDDNTDGFVEATENGHQEETAEEPKEDVTEPSAVMKNAESEEGQEKPIEPLD
TVNKESATNEPDANAIDLPSAENPEESDKVEHQESGVERQDPPSDVAPQGDVSSLKDQPT
SADQPTSRRMEVPSNKVGVLIGKAGDTIRTLQYSSGARIQITRDAEADPNSATRPVELIG
SIENINKAERLIKDVIAEADAGGSPSLVARGFSVHSSGIGEQIQIQVPNDKVGVIIGKGG
ETIKNLQTRSGARIQLIPQHLPEGDQSKERTVRVTGDRKQIETAKEMIKEVMDQPIRSST
PSGGGNNQQQNFRPRGPGPNWGPRGHPSPSGYNYPPRGAYPSQNPPYSSQGYGNYPPQQP
PPPPKNNFGWDQRPPTNMQGPPEQTGYDYYSGQGGHMAASAAQPPMHSHPPGSAMGPPSQ
VNYNYGQPQGPDYGQQPPPAPYAQTAPQGYSQGYGETRYDHQGPAQHPYGGQGTQPSTYP
PANTAHPGYGQQDQYGKLLAYNMPQQGPYAQPYGQPRQQPYPASSGPMPPQAYPQYGTAP
AANDMYTATGGYSQQGGQPVSGYAQTGVQPQQAAAPGYVQAGPTTGYGQYPSTQSGYSEQ
VAPSSAGYGYQGAPDPAYASGPGMAYGAPPAVQPAYSQPAPVQPGYDQSIPQAGGYATPQ
PQPQPQPQPQAGYGQYDSSQMYAAHR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaggttatgggctcagctagccctgctccgtccgatcacaaacggaag
cttgatgatttggatagcgaacccttcgaacaaccaccggtttctgccgactccaatggc
aattcgcagtcggtggctgacgctgacggtgatgctgctcctaccgatatttctccggaa
gatcctgacgtgaaacgacctcgtctggatgacaacacagacggttttgttgaagcgacc
gagaatgggcatcaggaggaaacggcagaggaaccaaaggaagacgttactgaaccatcg
gctgtgatgaagaatgccgagtcagaggagggtcaagaaaaacctattgaacccttggac
acagtgaacaaagaatctgcaactaatgaacccgatgcaaatgccatagatttgccatct
gctgagaatcctgaagaatcagataaagtggaacatcaggaatccggagtagaacgtcag
gatcccccttcagatgttgctccacaaggggatgtgtctagtttgaaggaccaacctacg
tctgctgaccaacctacttcacgtaggatggaggttccgagtaataaggttggggtccta
attggcaaggctggagacactatcagaacattgcaatatagctcgggggcaagaattcaa
atcacacgtgatgctgaggctgatccaaattcggctactaggcctgtagaattaataggt
tccatagagaatataaacaaggctgagaggctgataaaagatgttatagcagaggctgat
gctggtggttccccttctttggttgccagaggttttagtgtccactcctcagggattgga
gaacaaattcaaatacaagttccaaatgacaaggttggtgtcatcattggcaaaggtgga
gagactataaaaaacctgcagacacgatctggagctcgcattcagttgattccacaacat
cttcctgagggtgaccaatctaaagaaagaactgtgagagtcaccggtgataggaaacag
attgagactgcaaaggaaatgattaaggaagtgatggaccagcctatacggtcatcaacc
ccatcaggaggtggtaataatcagcagcagaactttcgtcctcgtggacctggacccaac
tggggacccagaggtcacccatcaccatctgggtataactatccaccacgtggagcgtat
ccatctcagaatccaccctactcgtcacaaggttatggtaattatcccccacaacaacca
ccaccaccaccaaaaaacaattttggttgggaccaaagacctccaacgaacatgcagggg
cctcctgaacaaactggttatgactactatagtgggcagggcggccatatggcggcatcg
gctgcacaaccaccaatgcattcccatcctcctggctctgcaatgggcccgccttctcaa
gtaaattataattatggacaaccacaaggtccagattatgggcagcagccgccccccgct
ccttatgcacagacggcaccacagggttacagtcaaggttatggtgaaaccagatatgac
caccaggggccggctcagcatccatatggaggacaagggactcagccgtcaacttaccct
ccagcaaacaccgctcatccaggctatggtcagcaggatcagtatggtaagctgctagcg
tacaacatgccacaacaggggccctatgctcagccttacggtcagcctcgacaacagccg
taccctgcatctagcggcccaatgccgccacaagcttaccctcaatatggcactgctcct
gctgctaacgatatgtacacagccacggggggttattctcagcaaggtggtcaacctgtt
tctggatatgctcagactggtgtccagccacagcaggcagcggcaccaggttatgttcag
gccggacccaccactggttatggtcagtacccttccacacaatctggatacagtgaacaa
gtggctccaagcagtgcaggttacggttaccaaggtgcaccagatccagcgtatgccagt
ggtccaggaatggcctatggtgcaccacctgcggttcagcctgcttattctcaaccggct
ccggttcaacctgggtatgaccaatctatacctcaagctggtggttatgcaactccacag
ccacaacctcagccgcagccacaaccacaagcgggttatggtcagtatgacagtagtcag
atgtatgcagcgcaccgttga
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