Cynara cardunculus var. scolymus (artichoke): 112511197
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Entry
112511197 CDS
T05604
Name
(RefSeq) chloride channel protein CLC-a-like
KO
K05016
chloride channel 7
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112511197
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112511197
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112511197
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112511197
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112511197
Ion channels [BR:
ccav04040
]
Chloride channels
Chloride channel (CLC)
112511197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112511197
NCBI-ProteinID:
XP_024972488
LinkDB
All DBs
Position
LG 1:11590628..11595546
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AA seq
790 aa
AA seq
DB search
MRTAFDRMEEESDQLAETTTYNMEEQTEPQESEPKSNSIHQPFLEKNQTLSSIPLAMIGA
KVSHIESLDYEINENDLFKHDWRSRSRVQIMQYTLLKWLQALLVGLLTGITATLINLAVT
NIAGYKLLAVFHYIKKKRYMMGFFFMTGVNLLLTLVATILCVFFAPTAAGPGVPEIKAYL
NGIDTPGMYDATTLFVKIIGSIGAVSAGLDLGKEGPLIHIGACIASLVGQGGPDNYQIKW
RWIRYFNNDRDRRDIITYGASSGVCAAFHAPVGGVLFSLEEVATWWRSALLWRTFFTTAI
VVVVLRASMEYCEAGGCGLFGEGGLIMFDVSGVPVTYHFVDLIPITLIGIIGGVLGSLYN
YLLHKVLRVYSLINEKGRLAKILLSLTVALFTSACQYGLPFLVSCKPCDPSLYSKCPNTG
RVGNFKQFNCPKGHYNDLATLLLTTNDDAVNNIFSINTSTEYQTISLVIFFMLYCILGLI
TFGIAVPSGLFLPILLMGSSYGRMVGIAMEPYSKMDQGLYAVLGAASLMAGSMRMTVSVC
VIFLELTNNLLLLPITMFVLLIAKSVGDCFNPSIYEIILDLKGLPFLEAHPKPWMRNITV
GDLAAVKPPVVTLSGIEKVSRIVDVLRNTTHNGFPVVYNTVVPHVGQVTEVHGLVLRAHL
LLVLKKKWLLQERRRTEEWEIRERISCVDAAERWGNIKEVTLTKEETEMYVDLHPLTNTT
PHTVVETMSVAKAMVQFREVGLRHMLVLPKYSGPAVPPLVGILTRQDLRAHNILSAFPNL
EKSHAGRKRH
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactgcatttgatcgaatggaagaagaatcagaccaattggcagagacaactacc
tacaatatggaagaacaaacagaaccacaagaaagtgagccaaagagcaattccattcat
cagccattcctcgagaaaaatcagaccctttcttccattccactggccatgattggggcc
aaagtttctcatatcgaaagcttggactacgagatcaatgaaaatgatcttttcaagcat
gactggagaagcagatcacgagtccaaataatgcagtatacattattgaaatggttacag
gctttactagttgggcttctaactggtatcacagccactctcatcaatcttgcagttacg
aacattgcaggctacaaactcctggctgtcttccactacataaagaaaaagagatacatg
atggggttcttcttcatgactggggttaacttactattgacactggttgctactattttg
tgtgtgttctttgctcctactgcagctgggcctggtgttcctgaaatcaaagcttatctt
aatgggatagacacccctggaatgtatgacgctacaacattgttcgtaaagatcattgga
agcataggagctgtctctgcaggcctggacttagggaaagaagggccactgattcacatt
ggtgcctgtattgcttcattagtaggccaaggtgggccagacaattaccaaattaaatgg
cgttggatccgttacttcaacaatgacagagaccgccgagatatcatcacttatggagcc
tcttcgggggtatgtgctgcctttcatgcaccagtgggtggtgtcttgttttcacttgag
gaggtggcaacatggtggagaagtgctcttctgtggagaacttttttcaccacagccatt
gtggttgtagtgcttagagcttccatggagtattgtgaagctggaggctgcggacttttt
ggagaagggggactgatcatgtttgacgtcagcggagttccagtgacgtatcattttgtt
gacctcatccccatcactttaataggaattattgggggagttttaggaagcctttacaac
tacctccttcacaaggtcctcagagtctacagtctcattaacgagaaaggaagattagcc
aagatattactaagtctcacagttgcattatttacctctgcatgccaatacggactacca
ttccttgtaagctgcaagccctgtgatccatccctttattctaaatgtcctaatacagga
agggtggggaatttcaagcaattcaactgtccaaaaggacactacaatgatctagctact
ctcctcctcacaaccaatgatgatgctgtaaacaatatcttctccatcaacacttccaca
gaataccaaacaatctccctcgtcattttcttcatgctttattgcatactgggtctcatc
acattcggcattgcagttccatctggccttttcctccctatcctccttatgggctcatcc
tacggccgcatggttggtattgcaatggagccatactcaaagatggaccaaggtctctat
gctgttttgggtgcagcttccttgatggcaggttcaatgaggatgaccgtttccgtttgt
gtcatatttcttgaattaaccaacaatcttcttctactacccataaccatgtttgtcctt
ctaattgccaaaagtgttggagattgcttcaacccaagcatctatgagatcatactagat
ctgaaagggctgcctttcttggaagcgcaccctaaaccatggatgagaaacatcactgta
ggtgacctagctgcagttaagccaccagtagtcaccctttctgggatcgagaaagtgagc
cgcatagtggatgttttgcgaaacaccacacacaatggtttccctgtagtatacaataca
gttgtgccccatgttggtcaggtaactgaagtgcatggacttgttttacgagctcacctt
ttgttggtgctgaagaaaaaatggcttttacaagagaggaggagaacagaagagtgggaa
attagagaaagaattagctgtgttgatgcggcagaaaggtggggaaatatcaaggaggtg
actctgacaaaggaagaaacggaaatgtacgtggacttgcatccacttaccaacacaact
cctcataccgtggttgagaccatgtcagttgcgaaggctatggtgcaattcagggaggtg
gggctccgccatatgctcgtcttaccaaagtactcaggaccagcagtgccaccactggtg
gggatcttgaccaggcaagacttgagagcccacaacattttgagtgcttttccaaatctg
gaaaaatcccatgcaggtagaaaaagacactga
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