Cynara cardunculus var. scolymus (artichoke): 112511240
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Entry
112511240 CDS
T05604
Name
(RefSeq) transcription initiation factor IIF subunit beta
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112511240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112511240
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
112511240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
112511240
NCBI-ProteinID:
XP_024972547
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All DBs
Position
LG 4:complement(13237466..13249036)
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AA seq
257 aa
AA seq
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MEDEQKNTDLETARADRSVWLMKCPVVVAKSWQSVPADSQQNLSKVVVSLDPLHPEDPSS
LQFSMEMAGSEIANMPKSYSLNMFKDFVPMCIFSEANQGKVAMEGKVEHKFDMTPQNKNM
EEYRKMCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMIGLISSNPKEKKKAAPVKAPEV
KRTRRDRGELEHIMFKLFERQPNWALKQLVIETDQPAQFLKEILNDLCVYNKRGTNQGTY
ELKPEYKKSMEDTTAEE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagcagaagaacacggacctggaaactgctagagcagacagatctgtgtgg
cttatgaagtgccctgtggtagtcgctaaatcatggcaatctgtccccgccgactctcaa
caaaatctctctaaggtcgtcgtttccctcgatcctcttcatcccgaagatccttcttct
cttcagttctcaatggagatggctggcagtgagattgcaaatatgccgaagagctactct
ttaaatatgttcaaggattttgttcccatgtgcattttctctgaagcaaaccaaggaaaa
gttgctatggaagggaaagttgaacacaagtttgacatgacaccccagaataagaacatg
gaggagtacagaaagatgtgccgtgaacgaacaaataagtccatggtcaagaatagacag
atacaggtgattgataatgaccgaggtgtgcatatgaggcccatgcctggaatgattggc
ttgatttcgtctaatcctaaggaaaagaagaaagcagctccagttaaggcgcctgaagtt
aagagaactaggagggatcgtggagaactggaacacatcatgtttaagctttttgaaaga
cagcctaattgggctctaaagcagttggtcatagagaccgaccagcccgcgcaattcttg
aaagagatattgaacgatctgtgtgtttacaataaacggggaacgaatcaaggaacatat
gagctgaagccagaatataagaaatccatggaggatacaactgctgaagaataa
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integrated database retrieval system
