KEGG   Cynara cardunculus var. scolymus (artichoke): 112511259
Entry
112511259         CDS       T05604                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112511259
   04145 Phagosome
    112511259
   04148 Efferocytosis
    112511259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112511259
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112511259
   04031 GTP-binding proteins [BR:ccav04031]
    112511259
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112511259
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112511259
  Exosomal proteins of other body fluids (saliva and urine)
   112511259
  Exosomal proteins of colorectal cancer cells
   112511259
  Exosomal proteins of bladder cancer cells
   112511259
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112511259
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 cobW RsgA_GTPase AAA_16 Septin nSTAND3 AAA_7 AAA_24 AAA_22 DAP3 NACHT PduV-EutP nSTAND1 ATPase_2 Sigma54_activat AAA_5
Other DBs
NCBI-GeneID: 112511259
NCBI-ProteinID: XP_024972571
LinkDB
Position
LG 4:complement(10378238..10386687)
AA seq 205 aa
MSFRKRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDKIVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPSSFPF
ILLGNKIDIDGGNSRVVSEKKALDWCTFKENIPYYETSAKEDYNVDAAFLCIAKSAMANE
HEQDLYFQGVPDAVTETEQRGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtccttccgtaaacgaactctgctcaaggttattgtcctcggcgacagtggggttggc
aagacgtcattgatgaatcaatatgtacataagagattcagtcaacaatataaagctaca
attggagctgattttgtgaccaaggagttacagatagatgacaagattgttacactgcaa
atatgggacactgctggccaggagaggtttcaaagtcttggtgttgcattttatagagga
gccgattgctgtgttttagtgtatgatgtaaatgtaatgcgatcatttgacacacttgac
aactggcatgaggaatttctcaagcaggcaaacccatcagatcccagttcttttccattc
atattgcttggcaacaagattgatatagatggtggaaatagccgagtggtttctgagaag
aaggcattggactggtgtacttttaaagagaatataccttactatgagacatctgcaaag
gaagactacaatgtggatgctgcatttctatgtattgccaaaagtgcaatggcaaacgag
cacgagcaggatctatacttccagggcgtcccagatgccgtaacagaaacagaacaacgt
ggtggctgcgcatgctaa

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