Cynara cardunculus var. scolymus (artichoke): 112511274
Help
Entry
112511274 CDS
T05604
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00531
Glycosaminoglycan degradation
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112511274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccav00536
]
112511274
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
112511274
Glycosaminoglycan binding proteins [BR:
ccav00536
]
Heparan sulfate / Heparin
Enzymes
112511274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112511274
NCBI-ProteinID:
XP_024972601
LinkDB
All DBs
Position
LG_4
Genome browser
AA seq
538 aa
AA seq
DB search
MEFCVSLFLFLASISAIFAQYVQESELVINATLPLAHTDANYICATIDWWPDEKCNYNHC
PWGSSSALNLDLSHPILAKAVQAFERLRIRVGGSLQDQVVYNVGDFSGPCHPFIRMKGEL
FGFSRGCLCMDRWDELNRFFVKTRALVTFGLNALHGRHQLKKGVWGGNWNSSNARDFMKY
TISKGYQIDSWEFGNELSGKGIGAMVHAEQYAYDVIELRGVIDSLYQEFQPKPLLVAPGG
FFDKQWFAKLLKVSGSEIVDVMTLHMYNLGPGVDPNLVKNILDPHFLSRASITFGDLRQT
IQRNGPWASSWIGESGGAYNSGGLHVSDTFVNSFWYLDQLAMAAKYHTEVYCRQSLIGGN
YGLLNKTTFVPNPDYYSALLWHRLMGTGVLVVERINAGPHLRSYAHCSKGKAGITLLLIN
LSNQTEFQLKVHNILNLNLPTTKPNNGSFTHRLKSMFSWVGSKSTDEKLPREEYHLTPQD
GNIRSKTMLLNGVPLQLTETGDIPDLKPAMVDVSSPICIAPLTIKFIQFPSFDACGCK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagttttgcgtctcattgttcttatttctggcatcaatttctgcgatttttgcacaa
tatgttcaagagtcggaacttgtaattaatgcaactttaccattggctcacacggatgca
aattatatttgtgctactattgattggtggcctgatgaaaaatgtaactacaaccattgc
ccatgggggtcatcatcggctttaaatctggatttatctcatcctattcttgccaaagca
gtccaagcttttgaacgtctcagaatacgtgtaggaggttccttgcaagaccaagtggtg
tataatgtgggggatttctcgggtccttgtcatccctttataagaatgaagggggaattg
tttggattctctaggggttgtctttgtatggataggtgggatgaattgaatcgttttttt
gtcaagacaagagcacttgtgaccttcggcttgaatgcgctccatggaagacaccagctt
aagaagggagtttggggaggaaactggaattccagcaatgcccgtgattttatgaagtat
actatttccaaggggtatcagatagattcatgggaatttggtaatgagttgagtggcaag
ggcattggtgccatggttcatgctgagcagtatgcgtatgatgtaattgaactcaggggt
gtaattgacagtttgtaccaggaattccagccaaaaccgttgcttgtagcaccaggaggg
ttcttcgacaaacagtggtttgcaaaacttcttaaggtttcgggttcagaaattgttgat
gtaatgacactccatatgtataatctgggcccaggcgttgatccgaatttagtgaaaaat
attttggatccccatttcttgagtagggcttccatcacgtttggtgatctccggcaaacc
attcaaagaaatggaccatgggcatcttcttggatcggagaatctggtggtgcatacaac
agtggtggtcttcatgtttcagacacgtttgtaaatagcttctggtacttggatcagctt
gcaatggcagctaagtaccacacggaagtatattgccgccaaagtttaattggtggaaat
tatggtcttctcaataaaacaacatttgtgcctaaccctgattattacagtgcacttcta
tggcatcggcttatgggaacaggggttcttgttgtagaaaggataaatgccgggccacat
ttgcgctcttatgcccattgttcaaaagggaaagcaggcataacattgcttctgattaat
ctaagcaaccaaacagagttccagctcaaagttcacaacatcttgaatctgaatttgcct
acaacaaaacccaacaacggatctttcactcatcggctaaagtcaatgttttcgtgggtc
gggtcaaagtcaaccgatgaaaaactaccccgagaggagtaccacctgaccccacaagac
ggcaatatcagaagtaaaacgatgcttttaaacggagttccattacaacttacagaaacc
ggagacatcccagatttgaaacctgcaatggtggatgttagttctccgatttgcatcgct
cctttgaccatcaagttcatccagtttccgagctttgatgcttgcggttgtaaatga
DBGET
integrated database retrieval system
