Cynara cardunculus var. scolymus (artichoke): 112511291
Help
Entry
112511291 CDS
T05604
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112511291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112511291
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112511291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
112511291
NCBI-ProteinID:
XP_024972627
LinkDB
All DBs
Position
LG 4:complement(11219899..11222331)
Genome browser
AA seq
256 aa
AA seq
DB search
MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRVVDGREMMVQFAKYGPNAERIHKGRILEPVEKLKRMSRSR
SPRPRYRDEYRDRDYRRRSRSRSRDRYDRDRHRGRDRDRYHSRSRSRSPDYGKERRRGRY
DYEKSRSRSPDRSGSPTHHSSRPRGSVSPHQTPSRSRSPVALDDKERSPPPRSVSPRRRA
DSRTPSPVPSNADEQM
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttcggaagagcaggtcctcctgacatcagagacacctattcgctcctcgtt
ctcaacatcactttccgtactactgctgatgatctgttccctctttttgataagtatgga
aaggttgttgatgttttcatcccccgagatcgtaggactggggattctcgggggtttgcc
tttgtgcggtataagtatgctgatgaagcccagaaggcagtggaaaaacttgatggaagg
gttgttgatgggagagagatgatggttcaatttgccaagtatgggccaaatgctgaacga
attcataagggaagaatactggaaccggtggagaagctgaagaggatgtcaaggagtcga
agtcctaggccaaggtacagagatgaatacagggacagagactacaggaggagaagccgt
agcagaagcagggataggtacgatcgtgataggcatcgaggaagggacagggatcgctac
catagtaggagtcgcagtagaagtcctgattatggcaaagagcgtaggagaggaagatat
gactatgagaaaagccgaagtcggtctcctgacagaagtggttctccgacgcatcatagc
agccgtcctcgagggagcgtatctccacatcaaacaccttctaggagcagaagtcctgta
gctctcgatgacaaagaacgctcacctcctccaagaagtgtttccccccgtcgtagagct
gattcacgaaccccttctccagtgccttcgaatgctgatgaacaaatgtga
DBGET
integrated database retrieval system
