Cynara cardunculus var. scolymus (artichoke): 112511396
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Entry
112511396 CDS
T05604
Name
(RefSeq) transcription factor MYB52-like
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112511396
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112511396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Protocadherin
Motif
Other DBs
NCBI-GeneID:
112511396
NCBI-ProteinID:
XP_024972764
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All DBs
Position
LG_4
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AA seq
311 aa
AA seq
DB search
MEENGGGGSSDDTRTCPRGHWRPAEDEKLRQLVERYGPQNWNSIAEKLQGRSGKSCRLRW
FNQLDPRINRRPFTEEEEERLLAAHRVHGNRWALISRLFPGRTDNAVKNHWHVIMARKQR
EKSKLCDKRRYHDDLHSRNPNIDQELHQRDTNSKKYSTSISFATSYSHFMQFQNLNKDGI
SSWSFASPTTMLAANRSPSSGDLTTDCFSSRMHHHSLSDHFTSRNYLSSNGGYRDTSAYG
HQFHNRVHFSNPIENSHETVLKRQLVSSENNLPMPVRSTAIFEQHKEEEEEAIKHKDEVP
FIDFLGVGLSS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacggaggtggtggctctagcgatgacacgaggacatgtccaagaggacac
tggagacctgctgaggatgagaaactcaggcagcttgtcgaacgctatggtcctcagaac
tggaactcgattgccgagaagcttcaaggaagatcagggaagagttgcagactaagatgg
tttaatcaacttgatcccagaataaatagaaggccattcacagaagaggaagaagaaagg
ctcttagcagcccatagggtacacggaaaccggtgggctctcatatcgaggctatttcca
ggtcgaaccgataacgccgtcaagaatcattggcatgttattatggcaagaaaacaaagg
gaaaagtccaaactttgcgataaaagaaggtaccatgatgatttacatagtcgtaatccg
aatattgatcaagaattacaccaaagagacacaaactcgaaaaagtattctacctccatc
tcttttgctactagctatagtcattttatgcaattccagaatttaaacaaagatgggatt
tcctcatggagctttgcaagtccgaccaccatgctagcggccaatcgatctccatcttct
ggcgatttaactacagattgcttcagttctagaatgcatcaccatagtttatcagaccat
ttcacttcccgaaactatttaagttctaatggaggatatagggacactagtgcatacggg
catcagtttcacaatagggttcatttttcaaaccccatcgaaaatagtcatgagactgtg
ctcaagaggcagttggttagttccgagaacaacctgccaatgccggttaggtcgacagca
attttcgagcaacataaagaagaagaagaggaagcaatcaaacacaaggatgaagtacct
ttcatagattttcttggtgtgggactttcttcttga
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