Cynara cardunculus var. scolymus (artichoke): 112511417
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Entry
112511417 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112511417
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112511417
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112511417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112511417
NCBI-ProteinID:
XP_024972792
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All DBs
Position
LG 4:complement(16289684..16296054)
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AA seq
187 aa
AA seq
DB search
MDGPPGNDFCSICHGNFHIPHQANCSHWYCGNCILQVWNHGSALQPCKCPLCRRQITLLV
PSQASSQQVNDPEASEILKRIEGYNRFFGSHSTGLSQRVQDLPFLLRRLFRELMDPQRSL
PFVIKARVYLALISTAIYVLSPVDIIPEALFGILGLLDDFIIALIFFLHVGTLYRAILVR
RYGGSST
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggacggaccaccaggaaacgacttttgttcaatctgccacggcaacttccatatccct
catcaagccaattgctctcattggtattgcggcaattgcattttacaagtttggaatcat
gggtcagcattacagccatgtaaatgccctctttgtcgtcgccagattactttgttggtt
cctagccaggcttcctctcagcaagttaatgatcccgaagcttctgagattttaaaaagg
atagaagggtataaccgtttcttcggttcacattcaactggtctcagccagagagtgcaa
gacctgccatttctcctcaggcggttgtttcgagaactaatggatcctcaaagatctctt
ccgtttgtcatcaaagcacgcgtatatctggcactaatatcgactgccatttacgtgctc
agccctgttgacattattcccgaagcattgtttggaatacttggtctattggatgatttc
attatagccctcattttcttccttcacgttggcacgttgtatcgggctatacttgtgcgt
cgctacggaggatcttccacctga
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