Cynara cardunculus var. scolymus (artichoke): 112511470
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Entry
112511470 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 11
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112511470
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112511470
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112511470
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112511470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF6526
ComR_TPR
Wzz
Motif
Other DBs
NCBI-GeneID:
112511470
NCBI-ProteinID:
XP_024972870
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All DBs
Position
LG 4:12577401..12581524
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AA seq
532 aa
AA seq
DB search
MRRRAADYRRRVRRRLPIWIWVFLVLFSVAGFVLIFVQHNYQDQDQDRVKQPVLEQNARK
VKVTHKKLNLTKEIASANSYARQLLEQMTLAKAYVVIAKEHNNLHLAWQLSSNIRSCQFL
LSKAAMRAEAITQDEAEPLISSLSALILKSQDAHYDIATTMMTMKSHIQALEERANAATI
QSAVFGQLAAESLPKNLHCVNVKLLADWITKKKIQELAEEKNNSPRLLDNNLYHFCLFSD
NLLAVSAVVNSTVSNADHPKQLVFHVVTNGANYAAMQAWFVTNDFKGSMIEVQKVEDFTW
LNASYSPVVRKLSENNFQGYPLEGSQDFLNPKYISLLHHLQFYIPEIYPHLEKVVFLDDD
VIVQKDITPLFSLDLHGNINGAVETCLEAFHRLYKYLNFSNPIVSSKIDPQACGWAFGLN
VFDLVAWRNANVTARYHYWQEQNADGNVWKLGSLPAGLLAFYGRTEPLDRRWHVLGLGYD
VNIDSRLIESAAVIHFNGNLKPWLKFGIARYKPLWQRYVNRTHPYLLDCVTS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggcgggctgccgactaccggcgtcgtgttcgaaggaggcttccaatttggatc
tgggtctttcttgtgttgttctctgtcgctggatttgttctaatctttgttcaacacaat
tatcaagatcaagatcaagatcgggttaaacagcccgtattggaacaaaatgctagaaaa
gtaaaagtgactcacaagaagttgaatctaacgaaggagatagctagtgccaattcgtac
gccagacaattattagagcaaatgacacttgcaaaagcgtatgtagtcattgcaaaagaa
cacaataaccttcatcttgcttggcagctaagttcaaatataagaagctgtcagtttctg
ctttcgaaagctgccatgagagcggaggccataacacaagatgaagctgaaccgcttatt
agtagcctatcggctctaattttaaaatcgcaagatgcccattatgatattgcaaccaca
atgatgacgatgaaatctcacattcaagcacttgaagaacgggcaaacgcagccaccatt
caaagtgcggtttttggacagctagcggctgaatcactgcccaagaatcttcactgtgta
aatgtgaaacttttggcggattggattacgaagaagaagatacaggagcttgctgaggag
aaaaacaactccccaagattattggacaacaatctttaccatttctgtttgttttcagat
aatttactggcggtttcagctgtggtcaactctacggtctccaacgctgaccatccgaag
cagcttgtgttccatgtagttactaatggagccaactatgcagccatgcaagcttggttc
gttaccaatgacttcaaagggtccatgattgaagttcaaaaagtcgaagacttcacttgg
ttgaatgcttcttactctcccgttgttaggaaattaagtgaaaacaactttcagggatac
cctcttgaaggctcgcaagattttttgaacccaaagtacatatctttattacaccacctt
cagttctacatccctgagatttatccacaccttgaaaaagtcgtctttcttgacgacgat
gtgattgttcagaaagatataacccctcttttctccttggatcttcatgggaacataaat
ggagctgtggaaacgtgccttgaagcttttcaccgactttataagtatctaaacttctca
aacccaatcgtgagctccaagattgatccgcaggcttgcgggtgggcatttgggctaaac
gttttcgatttggtggcttggaggaatgcaaatgtgacagccagatatcattactggcaa
gaacagaatgcagatggaaatgtgtggaaattagggagtttgccggccggtcttttggcg
ttctacggacggacggagccactagaccgaagatggcacgttttagggctaggatatgat
gttaacatcgatagcaggctcatagaaagtgcagctgtgattcatttcaacgggaacctg
aagccatggctaaagtttgggattgcgaggtacaagcctttatggcaaaggtacgtaaac
agaacacacccgtatctccttgattgtgtcactagttga
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