Cynara cardunculus var. scolymus (artichoke): 112511492
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Entry
112511492 CDS
T05604
Name
(RefSeq) SNAP25 homologous protein SNAP33-like
KO
K18211
synaptosomal-associated protein 25
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112511492
Membrane trafficking [BR:
ccav04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
112511492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
DUF5089
DUF7799
V-SNARE_C
TMP_2
Use1
Motif
Other DBs
NCBI-GeneID:
112511492
NCBI-ProteinID:
XP_024972894
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Position
LG 4:12360282..12363699
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AA seq
306 aa
AA seq
DB search
MFGIKKPHFHLHRTGKNNSVDPSHHAPNPFDSDDEFDKKSTLNQTRRTSSEPALLVPDSR
ASLFDDDEVKGTSGSSGYKLSYASRNKYKNDFVDSGGIENQDVQELEEYAAYKAEETTKT
VNSALKIAENIREDATKTMITLHQQGEQITRTHMTAADIEQDLSRGEKLLGSLGGIFSRT
WKPKKGHAITGPMITRDDPALRKGAHLEQREKLGLTTTPTKGQRHSKTPPSEPTNAMQKV
EYEKSQQDDALSDLSNILGELKEMAVDMGSEIERQNKALDPLQDDVDELNFRVRGANQRT
RRLLGK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatcaagaaacctcatttccatcttcatagaactggcaaaaacaattcagtt
gaccccagccatcatgcaccgaatccattcgattctgatgacgagtttgacaaaaagtca
accctaaaccagactagaagaacctcatctgaacctgcattattggtcccagattcaaga
gctagtctttttgatgatgatgaggttaaggggacctcaggttcatctgggtacaaactt
agttacgcatcaagaaacaaatacaagaacgattttgttgattctggtggaatagagaat
caagatgtgcaagaattggaggagtatgctgcgtataaggctgaagagactacaaaaacc
gttaacagtgccttaaagattgcagaaaacataagagaagatgccaccaagaccatgatc
acgctgcatcaacagggtgagcagatcactaggactcacatgactgcagctgatatcgag
caggatcttagcaggggcgagaagcttttgggaagtcttgggggtattttctcgaggact
tggaagcctaagaagggtcacgctataacaggaccaatgatcacaagagatgatcctgcg
ctacgaaagggtgcccatttggaacaaagagaaaaactgggacttacaacaaccccgact
aagggacagcggcattcaaaaacaccgccctctgaaccgacgaacgcaatgcagaaagtt
gagtacgagaaaagccagcaagacgatgccctctcggatttgagtaacatacttggggaa
cttaaagaaatggccgttgacatgggttctgagatcgaaaggcaaaacaaagctcttgat
cctcttcaagatgatgttgatgagctcaatttccgagttagaggtgctaatcaacgtact
cgacgtttgcttggaaaataa
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