Cynara cardunculus var. scolymus (artichoke): 112511493
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Entry
112511493 CDS
T05604
Name
(RefSeq) 25.3 kDa vesicle transport protein-like
KO
K08517
vesicle transport protein SEC22
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
ccav04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112511493
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112511493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112511493
Membrane trafficking [BR:
ccav04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112511493
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF3375
Motif
Other DBs
NCBI-GeneID:
112511493
NCBI-ProteinID:
XP_024972896
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Position
LG 4:complement(20007127..20012000)
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AA seq
218 aa
AA seq
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MVKLTMIARVTDGLPLAEGLDDGRDMQDAEFYKQQVKALFKNLSRGQNEASRMSVETGPY
IFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERGYGNQIETAARPYAFIKFDTFI
QRTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSDTRI
YADKARDLNRQALIKKWAPVAIVLGVVILLFWARKKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacgatgattgctcgtgtcactgatggccttccgctagctgagggactg
gatgatggtcgtgatatgcaggatgcagagttctacaaacagcaagtcaaggctttgttc
aagaacctttcaaggggacaaaatgaagcctcgaggatgtctgttgaaactggtccttat
atttttcactatatcattgaagggcgggtgtgttatttgacaatgtgtgatcgtgcttat
ccaaagaaactggcgtttcaataccttgaagatcttaagaatgaattcgagcgtggttat
gggaatcaaatagaaactgctgcaagaccgtatgctttcataaaatttgatacatttata
cagaggactaagaaattgtaccaggatacaagaactcagcggaacattgctaagttgaat
gatgagctctatgaagttcaccaaataatgactcgtaatgtacaggaagtcctcggtgtt
ggtgaaaagttggaccaggtcagtcaaatgtcaagccgcttaacttcagatacccgcata
tatgctgataaagcaagagatctaaatcgacaggctttgatcaagaagtgggctcctgtt
gcaattgttcttggagttgttatcctactgttctgggccagaaagaagatatggtga
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