KEGG   Cynara cardunculus var. scolymus (artichoke): 112511520
Entry
112511520         CDS       T05604                                 
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
  KO
K10770  alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112511520
Enzymes [BR:ccav01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.229  tRNA (carboxymethyluridine34-5-O)-methyltransferase
     112511520
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    112511520
SSDB
Motif
Pfam: Methyltransf_11 Methyltransf_25 Methyltransf_23 Methyltransf_12 Methyltransf_31 MetW DUF2226 Ubie_methyltran Methyltransf_9 Methyltransf_4
Other DBs
NCBI-GeneID: 112511520
NCBI-ProteinID: XP_024972937
LinkDB
Position
LG 4:10845659..10849552
AA seq 361 aa
MLIQVTRSKPHQFLASTFRSHTGKLQFTTTTMKEIKTKKSSSVSSPLNPDAKCSSSVQST
PEIEKKYVHRVYDAIAPHFSATRFAKWPKVSAFLNNLPSGSVILDAGCGNGKYLGLNPDC
VFIGCDISAPLIQICNDRGHEVLVADAVNLPYRTGYGDAAISIAVLHHLSTEHRRKKAID
ELVRIVKKGGHILITVWAVEQEDASLLNKWTPLTGKYLEEWIGPGSPRVRSSSSVTLESI
PETEVSVSEEEVKDSSNVSEGKEDCFVGIENGDKTDQQQEYFVPWHLPYHRAEVSGASAG
ALENGLARKDDNKGAIVYDRYYHVFGQGELERLVSGMKNAVIVDQFFDKSNWCVVLEKTS
C
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcttatacaagttacaagatcaaaaccgcatcagtttctagcttctacctttcgcagt
catacgggaaaactccaatttacgactacaactatgaaggaaatcaaaacaaagaagtcg
tcaagtgtatcatccccactcaacccagatgcgaaatgttcttcgagtgttcaatcaacc
ccagaaatcgaaaagaagtatgttcatcgtgtgtatgatgcaattgctcctcatttcagt
gcaacccgttttgcgaaatggccaaaagtttcggcttttttgaacaatctgccatctggg
tctgtaattttagatgcaggatgtggtaatggcaagtatttaggtctgaatcctgattgt
gttttcattggttgtgatattagtgcaccccttattcagatctgtaatgatagaggccat
gaggttttagtagcagatgctgtgaatcttccctatcgaaccgggtatggagacgctgcg
atttcgattgctgttttgcatcatcttagtactgagcataggaggaagaaagccattgat
gagttggttagaattgtgaaaaaaggtgggcatatcttgattactgtttgggctgttgag
caagaagatgcatctttacttaataaatggaccccactaaccggaaagtatttagaagaa
tggattggacccggtagtccacgtgtgcgtagctcttcttcggttacgttagaaagcatt
cctgaaactgaggtgagtgtttcagaggaagaagtcaaagattcgagtaatgtgagtgaa
ggcaaagaggattgctttgtgggtatcgaaaatggagataaaacggaccagcaacaggag
tactttgtaccttggcatttgccttaccatcgtgctgaagtgagtggagcttcggctggt
gcacttgagaatggtcttgcaagaaaagatgataataagggcgcgatagtgtatgacagg
tattaccatgtgtttggtcaaggggaacttgaaaggttggtttctggcatgaagaatgcg
gttattgtggatcaatttttcgacaagtctaattggtgtgtcgttctcgagaaaacttca
tgttaa

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