KEGG   Cynara cardunculus var. scolymus (artichoke): 112511577
Entry
112511577         CDS       T05604                                 
Name
(RefSeq) RNA pseudouridine synthase 7
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112511577
Enzymes [BR:ccav01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     112511577
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    112511577
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-GeneID: 112511577
NCBI-ProteinID: XP_024973023
LinkDB
Position
LG 4:17609127..17615718
AA seq 381 aa
MKRNREDMEIVWQTPANPPERRDYIFRNGIRYVKPYYFEFISHAKNRWAGKTIVDLFAEE
FKGRNRDYYDSAVKSGRIQVDGKTVPVSYRVQSSQKISHFVHRHEPPVMALDVKILHEGE
DVLTVYKPASVPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARSASQA
DLFRQQIESGMVQKQYIAKVVGEFPEEQVVNLRVNFNAREGRSTTEPEDMDEKGNATSNG
KAACTKFTRISTNGKYSIVSCHPITGRTHQIRVHLQSTGHPIANDTLYLTEFVDGGSRRT
FIAHKGTVKSSHSLDSKSNDDCISESQELIEDFGIDPMCTNCPNLAPIGYDGSEEGLWLH
CVRYSGPGWVYECPYPHWASL
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaagaggaatagagaagacatggagattgtgtggcaaactccggcgaacccaccggag
cgccgtgattatatcttccggaacggaattcgctatgttaaaccctactacttcgaattc
atttctcatgctaagaatcgctgggccgggaagaccatcgttgatctgtttgctgaagag
ttcaaaggtcgaaatcgtgattactatgattctgctgttaagtctggtcgcatacaagta
gatggaaagacagtgcctgtttcatacagagttcagtcatcacaaaagattagtcacttt
gtacataggcatgaaccgccagtgatggctttggatgtcaaaattctgcacgaaggagaa
gatgtactcactgtttataagcctgcatcagttccagtacatccatgtggtcaataccgt
aagaacacagttgttggtattcttcaggcagaacatgacttagcgcctgtctttcctgtt
catcggctagatcgtttggtctctggacttcttattcttgcaagaagtgcttctcaggct
gatcttttcaggcaacagattgaatctggaatggtgcagaaacagtatattgcaaaagta
gttggggaatttcctgaggagcaagttgttaatttgagggtaaatttcaatgctcgagaa
ggaaggagtaccacagagcccgaggacatggatgaaaaaggcaatgctacctcaaatgga
aaggctgcatgtacaaaatttacaagaatttctaccaatgggaaatatagtatcgtatca
tgtcacccaatcaccggaagaacccatcaaattcgtgtgcacctgcaatctaccggtcat
ccgatagccaatgacacactctacctcactgaatttgtcgatggtggttctagaagaaca
tttattgctcataaaggtaccgttaagtcgagccattcgttggattccaagtctaacgat
gattgcattagtgaatctcaagagttgatcgaagattttggcattgatccaatgtgcaca
aattgcccaaacttggcgccaatcggatatgatgggagtgaagaaggtttgtggcttcat
tgtgttagatacagtggacctggttgggtatatgaatgtccatatccacactgggcatct
ctttaa

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