Cynara cardunculus var. scolymus (artichoke): 112511577
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Entry
112511577 CDS
T05604
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112511577
Enzymes [BR:
ccav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
112511577
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112511577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
112511577
NCBI-ProteinID:
XP_024973023
LinkDB
All DBs
Position
LG 4:17609127..17615718
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AA seq
381 aa
AA seq
DB search
MKRNREDMEIVWQTPANPPERRDYIFRNGIRYVKPYYFEFISHAKNRWAGKTIVDLFAEE
FKGRNRDYYDSAVKSGRIQVDGKTVPVSYRVQSSQKISHFVHRHEPPVMALDVKILHEGE
DVLTVYKPASVPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARSASQA
DLFRQQIESGMVQKQYIAKVVGEFPEEQVVNLRVNFNAREGRSTTEPEDMDEKGNATSNG
KAACTKFTRISTNGKYSIVSCHPITGRTHQIRVHLQSTGHPIANDTLYLTEFVDGGSRRT
FIAHKGTVKSSHSLDSKSNDDCISESQELIEDFGIDPMCTNCPNLAPIGYDGSEEGLWLH
CVRYSGPGWVYECPYPHWASL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaatagagaagacatggagattgtgtggcaaactccggcgaacccaccggag
cgccgtgattatatcttccggaacggaattcgctatgttaaaccctactacttcgaattc
atttctcatgctaagaatcgctgggccgggaagaccatcgttgatctgtttgctgaagag
ttcaaaggtcgaaatcgtgattactatgattctgctgttaagtctggtcgcatacaagta
gatggaaagacagtgcctgtttcatacagagttcagtcatcacaaaagattagtcacttt
gtacataggcatgaaccgccagtgatggctttggatgtcaaaattctgcacgaaggagaa
gatgtactcactgtttataagcctgcatcagttccagtacatccatgtggtcaataccgt
aagaacacagttgttggtattcttcaggcagaacatgacttagcgcctgtctttcctgtt
catcggctagatcgtttggtctctggacttcttattcttgcaagaagtgcttctcaggct
gatcttttcaggcaacagattgaatctggaatggtgcagaaacagtatattgcaaaagta
gttggggaatttcctgaggagcaagttgttaatttgagggtaaatttcaatgctcgagaa
ggaaggagtaccacagagcccgaggacatggatgaaaaaggcaatgctacctcaaatgga
aaggctgcatgtacaaaatttacaagaatttctaccaatgggaaatatagtatcgtatca
tgtcacccaatcaccggaagaacccatcaaattcgtgtgcacctgcaatctaccggtcat
ccgatagccaatgacacactctacctcactgaatttgtcgatggtggttctagaagaaca
tttattgctcataaaggtaccgttaagtcgagccattcgttggattccaagtctaacgat
gattgcattagtgaatctcaagagttgatcgaagattttggcattgatccaatgtgcaca
aattgcccaaacttggcgccaatcggatatgatgggagtgaagaaggtttgtggcttcat
tgtgttagatacagtggacctggttgggtatatgaatgtccatatccacactgggcatct
ctttaa
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