Cynara cardunculus var. scolymus (artichoke): 112511595
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Entry
112511595 CDS
T05604
Name
(RefSeq) heat stress transcription factor B-4-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112511595
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
112511595
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
112511595
NCBI-ProteinID:
XP_024973044
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Position
LG_4
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AA seq
369 aa
AA seq
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MAMMLDNSCEGGILLSLDSHKAVPAPFLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPE
FARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTSQ
PQVTVNHHHHPHHFTGIGTGGGLQGGNNFFSYPTTRSISPPDSDDHLCCDNSPPLSSPTT
TTTTAGMLGIFHNSNHSISSGRGGNSVTALSEDNERLRRSNNMLMSELAHMRKLYNDIIY
FVQNHVKPVAPSNSYPSSLLLSSTNSNMNGQLLMQKQQQQQSFLNMGTNFNAASGYPNKS
QQLHASTINNIVDDNVNVSRTKLFGVPLLSKKRLHPEYGTNNTMVETHKARLVLENDDLG
LNLMPPSPC
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatgttagacaactcatgtgaaggagggatactgttgtcgttagactcccac
aaagcagtgcctgctcctttcctcaccaagacttaccaactggttgatgatccgtccacc
gaccatatcgtctcctggggtgaagatgacaccaccttcgtcgtctggcgcccacctgaa
ttcgcacgtgatctccttccgaactactttaaacacaacaacttctcgtccttcgtccgc
cagcttaacacctacggttttaggaaaatagtcccggacagatgggagtttgcaaatgag
ttcttcaagaaaggagagaagcatttgctgtgcgagatccaccgccggaaaacatcacaa
ccgcaagttacagttaaccaccaccaccacccacaccactttaccggcattggcactggt
ggcggcctacaaggcggcaataatttcttttcatatccaactacacggagtatctcccca
ccagactccgacgaccacctctgctgtgacaactcaccacctctctcttcccccaccacc
acaacaacaacagctggtatgcttggaatctttcataacagcaaccacagtattagcagt
ggtagaggaggcaactccgtgacggctttgtcggaggataatgaacggctacggcgaagc
aataatatgttgatgtcggagctggcgcacatgaggaagctttacaatgatataatctat
ttcgtacaaaaccatgtgaagccggtggcgccaagtaactcatacccttcatcgcttctc
ctatcttcaactaattcaaatatgaatggtcaattactaatgcaaaaacagcagcagcaa
cagtcatttttgaatatgggtactaattttaatgccgcaagtgggtatcctaataaatca
caacagcttcatgcttcgaccatcaataacattgtggatgataacgtcaacgttagtaga
acaaagctttttggtgttccattgttgtcgaagaagagattgcatccagagtatgggact
aataatacgatggtggagactcataaagcaaggttggtactggaaaatgatgatttaggg
ttaaatctcatgcctccttctccctgttaa
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