Cynara cardunculus var. scolymus (artichoke): 112511624
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Entry
112511624 CDS
T05604
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112511624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112511624
Ion channels [BR:
ccav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112511624
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
112511624
NCBI-ProteinID:
XP_024973087
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Position
LG_4
Genome browser
AA seq
751 aa
AA seq
DB search
MFDCCYKTTYIGGQKEGFVRLDDLDWNLSYPSNTGAMKRFGFNIEGVPPPGPPRPTASKS
IKLGMRRGSEGLINFGQSLRTGVTRAVFSEDLKVSEKKIIDPQDKNLLIWNKFLVLSCIL
AVYVDPLFFYIPVYHNKDRCLKIHKSLAHSITTVRTIVDIFYLVRIGLQFRTAYIAPSSR
VFGRGELVIDPGQIARRYMQRYFIVDLLSVLPLPQIVVWRFLHRSKGTGVLGTKKALLWI
VIVQYIPRSVRILPLFSELKKTVGVITETAWAGAAYYLVWFVLAGHIFGAFWYLLAVERK
STCWELTCKKDDRCEIEYLYCGHAETEGYKAWMKVSQATLDEHCLENEAYGEFDYGIYLQ
AVQSGVDSSEHFPSKYCYCLWWGLRNLSTLGQGLETSTYAKEIIFSIIIAISGLILFALL
IGNMQTYLQSLSVRLEEMRIKRRDSEQWMHHRLLPQELKERVRSYDQYKWVETRGVDEES
LVQSLPKDLRRDIKRHLCLNLVKRVPLFANMDERLLDAICERLKPSLYTEKTYVLREGDP
VDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEGDFCGEELLTWALDPKSAGNLPPSTRTV
MALTEVEAFALIADEVKFITSQFRRIHSRQVQHTFRFYSQQWRTWAASFIQAAWRRYSRR
KLLESHRLEEEEEEDDEYQDYDEDEDDDDINVNEESALIRGRASSSSFGATMLASKFAAN
TMKRIQRKRGTSTGFINLQKPSEPDFGAEDK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgttgttacaagacaacatacataggcggccaaaaagaggggtttgtaagg
ttggatgatctggattggaatttgtcatatccatctaatacaggtgcaatgaaaaggttt
gggttcaatatagagggagtaccccctcctggtcctccacggcctactgcgtctaagtcg
ataaagttaggaatgagaagagggtctgaaggacttataaattttgggcagagtttaaga
accggagtcacccgggcagtgttctcggaagatctcaaagtgtccgagaaaaaaataatc
gatcctcaagacaaaaatctactgatatggaacaagtttttggttttatcttgcattctt
gccgtatatgtggatcctttattcttctacatacctgtttatcataacaaggacagatgc
ttaaaaatacacaaaagtttagcacactccatcacaacggtgaggaccatagttgatatt
ttctaccttgtccgcattggtctccagtttcgcacagcatatattgctccttcttctcga
gtttttggacgtggcgaacttgtaatagatcctggacagatagcaaggcgatatatgcaa
cgttattttattgttgaccttctttcagtgctacctttaccacagattgtggtctggagg
ttccttcacaggtcaaaaggtacaggtgtgttgggcacaaagaaggctttactatggatt
gtaattgtgcaatacattcctaggtccgtccgtatcctaccactgttttcagagctcaaa
aagactgtgggtgtcattactgagacggcttgggccggtgcagcatattatttggtttgg
tttgttcttgctggccatatttttggggctttctggtatctgttagccgtggaacgtaaa
agtacatgctgggagctaacttgtaaaaaggatgatagatgtgaaatagaatatctctac
tgtgggcatgcggaaacggaaggctacaaagcttggatgaaagtcagccaggccactctt
gatgaacactgccttgaaaatgaggcatatggtgaattcgattatgggatctacttacaa
gctgtgcaatctggagttgattcatccgaacattttccgtctaaatactgctattgtttg
tggtggggcttgagaaacttgagtacactcggccaggggctcgaaaccagcacctatgct
aaagaaattattttctcgatcataatcgcaatatctgggctcatactctttgcccttctc
atcggcaacatgcagacttatcttcaatccctttcggttcggctggaagagatgaggatt
aaaaggcgagactccgaacaatggatgcatcatcggttacttccccaggagctcaaagaa
cgagtccgaagctacgatcagtacaaatgggtggaaacaagaggagtagatgaagagagc
ttggttcagagtctaccaaaagatctcaggagggatatcaagagacacctttgtctgaat
ttagtcaaaagggttccgttgtttgcaaatatggatgaacgcttactcgacgccatatgc
gagcgtcttaaaccgagtctctacacagaaaagacgtatgttctaagggaaggcgacccg
gtcgacgaaatgttgttcataatccggggtcgtttagaaagtgtcaccacggatggtggg
agaagcgggtttttcaaccggggtttcttaaaagaaggcgatttctgtggggaagaattg
ctaacgtgggccctagatccgaagtcggcaggtaacctaccgccatctactcggaccgtg
atggcgttaacggaagtcgaagcgtttgcacttatagcagatgaagtgaagttcattaca
agtcagttcaggcggattcacagtcgacaagttcaacacacgttccggttttattcgcaa
caatggaggacgtgggccgcgagctttatccaagcggcctggaggaggtattctagaagg
aagcttctagaatcccatcggttggaggaagaagaagaagaagatgatgaatatcaagat
tacgatgaagacgaggatgacgatgatattaatgttaacgaagaaagtgcgttgatacga
ggacgtgcatcatcctcatcgtttggtgcaacgatgttagcatcgaagtttgccgcaaac
actatgaaacgaattcaaaggaagcgtggtacgtctacggggtttattaatcttcaaaag
ccttccgagccggattttggtgcagaagataaatag
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