Cynara cardunculus var. scolymus (artichoke): 112511648
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Entry
112511648 CDS
T05604
Symbol
LOC112511648
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112511648 (LOC112511648)
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112511648 (LOC112511648)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_EML
NBCH_WD40
TPR_17
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
TPR_19
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_IFT140_1st
ANAPC3
TRM82_WD
Beta-prop_DCAF12
WDR90_beta-prop_4th
Rapsyn_N
TPR_14
TPR_2
Beta-prop_WDR19_1st
TPR_12
TPR_4
Motif
Other DBs
NCBI-GeneID:
112511648
NCBI-ProteinID:
XP_024973115
LinkDB
All DBs
Position
LG_4:7674942..7702419
Genome browser
AA seq
761 aa
AA seq
DB search
MESLSFHDGNITHFIDARSLHVRSDINHSLQLHSSFIRRLSLERELEAHQGCVNTIAWNS
KGSLLISGSDDTRVNLWSYHSRKLLHSIDSGHTANIFCTKFVPETSDELVVSAAADSEVR
LFNLSRLEGRGVEDSAINPSALFQCHTRRIKKLAVEPGNPNVVWSASEDATLRQHDFRET
TACPAAESTHRECRNVLLDLRCGAKKSLADPPKQPLVLKSCDISPTRPHLLLVGGSDAFA
RLYDRRMLPPLSSCRQKLPPPPCVNYFCPLHLSDHGRQGLHLTHVTFSPNGEELLLNYSG
EHVYLMDVNPVHANAMRYTSDDAMKFFNPTVILKEVQSKQSVSDFFSNRFPAKRNLAARL
DQCRKLLQIAEKSLKEGANYYYGIEACNDVLHGYGQIGHTLMHECLCLRAALLLKRDWKH
DDLMAVRDCYRAVKIDPTSFRALHCMAEALLQLGKHKEALEFAIAAQFSAPSNPEAAEMV
ENIRKCIDTVEAEVSNKAKEGTPSSETRAGRVLSLSDILYRSDASSDTSQPISGREDSDY
EEELEVDFETSISGDEAHEVESSNNFQRSLNVRIHRKGDSTINTCHTSSSCGSPKSSPRS
DRITRQHERAIDMKQRYVGHCNVGTDIKQASFLGQKGEYIASGSDDGRWFIWEKSTGRLI
KMLMGDGAVVNCVQSHPFDCVVATSGIDNTIKIWTPLASIPSVIAGGTAGPETANILDTM
EGNQRRLSHNRESLLPFEILEGFRMHEFPEGSLRPFECIQS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgctctcctttcacgatggcaacatcacccacttcattgatgctcgaagtcta
cacgttcgctccgatataaatcacagtctacaattgcattcgtcattcattagaaggctt
tctttggaaagagaactggaggcacatcagggatgtgtaaacactattgcatggaactca
aaaggctcactgttgatatctggatctgacgacactcgtgtcaatctttggagttatcat
agccgcaaacttttgcattccattgacagcggtcatactgcaaatatattttgtactaaa
tttgttcctgaaacatctgatgagttggttgtatctgcagctgctgattctgaagttcga
cttttcaatttgtctcgcttggaagggagaggtgttgaagatagcgctattaacccatca
gcactgtttcaatgccacaccaggagaattaaaaaattagctgtagaacctgggaatccc
aatgtggtctggagtgctagtgaggatgcgactttgagacaacatgatttccgggagacc
actgcttgtccagctgctgaatctactcaccgcgaatgtcgcaatgtattacttgacttg
cgatgtggagcaaagaagtcattagccgatcctcctaaacagccactcgtgctgaagtct
tgtgacattagcccgacgaggcctcatttgctccttgttggtgggagtgatgcatttgct
cgcttatatgatagacggatgcttccaccactttcttcctgccggcaaaagttgccacca
cctccatgtgttaactacttctgcccattgcatctttctgatcatgggcggcaaggtttg
cacctaactcatgttacatttagtccaaatggagaagagcttcttctcaattatagtgga
gaacatgtgtacttaatggacgtaaatcctgttcatgcaaatgctatgcggtacacatca
gatgatgcaatgaagtttttcaatccaaccgtcatactgaaggaggtgcaatctaaacaa
tcagtctccgatttcttctcaaatcgttttcctgcaaagaggaaccttgctgcccggctt
gaccaatgccgaaaactgcttcaaattgcagagaagtccttaaaagagggagccaactat
tattatggcattgaggcttgcaatgatgttttgcatggttatggtcagattggacacact
ctaatgcatgaatgtttgtgtttacgggcagctctgctcctcaagcgggattggaaacat
gatgatcttatggctgtaagagattgctatagggctgtgaaaattgatcctacttcattt
agggccctgcactgtatggctgaagctctattgcagttgggtaaacacaaagaagctttg
gagttcgccattgctgctcagttttcagctccgtctaatcctgaagctgctgagatggtg
gagaacataagaaaatgtatagatacagttgaagccgaagtctctaacaaggcaaaggaa
ggaacccctagttctgaaacacgagctggtagagtattatctctaagtgacatactttat
cggtcggatgcaagcagtgatacttcacaacctatatctggaagagaggactctgattat
gaggaggagttggaagtcgattttgaaacttcaatatcaggtgacgaagcccatgaagtt
gaatctagtaacaatttccagcgaagtttaaatgtcagaatccatagaaaaggtgattca
acgataaatacttgccatacaagtagctcctgtggatccccgaaatcatctcctcgaagt
gatagaattactcgtcagcatgagagagcaatagatatgaagcaaagatatgttggtcat
tgcaatgttgggaccgacattaaacaagccagctttctcggccaaaaaggtgagtacatt
gctagtggaagtgatgatggtagatggtttatttgggagaagagcactggtagacttata
aaaatgcttatgggagatggggctgttgtgaactgtgtgcagagtcatccatttgattgc
gtcgtagctactagtgggatagataataccattaagatttggaccccgcttgcttcaatt
ccatctgtcattgccgggggaacagccggaccagagactgctaatatcttagatacaatg
gaaggcaatcaacgcagattatcccataaccgtgaatcattactaccgtttgagatacta
gaagggttccggatgcatgagtttcctgaaggatcattgcgcccgtttgaatgtatacag
agctag
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