Cynara cardunculus var. scolymus (artichoke): 112511754
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Entry
112511754 CDS
T05604
Name
(RefSeq) ribonuclease TUDOR 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
112511754
NCBI-ProteinID:
XP_024973253
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All DBs
Position
LG 4:complement(17900419..17914145)
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AA seq
983 aa
AA seq
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MAQAAASSGWLRGRVKAAPSGDTLVIMGFTKAEIPPEKTIVLAHLSSPRLARRGGNDDPF
AWESREFLRKLCIGKDVVFKTEYTIPNFSREFCSLFVGTTNIAKEVVTHGWAKVKEAKGE
VTPEHAELLRLEEQARQQGIGLWNRAPGASAAAIRNLPPSSVGDPSNLDAMGLLAANKGR
PMEAIVEQVRDGSSLRVYLLPEFQFVQVFVAGIQAPSMGRRTMAEPTATTEVPSDEPNGE
TNGEIRGTLTSAQRVTASSAYNEVAPDPYGREAKHFTEIRVLNRDVRIVLEGVDKFSNLI
GSVYYPDGEAAKDLALELIENGFAKYVEWSAIMMEDEARRKLKAAELQAKKSKLRLWTNY
VPPATNSKAISDSFTGEVVEVVSGDCIIVADDAVPFGSPAAERRVNLSSIRCPKLGNPRR
DEKPAPYAREAREFLRTRLIGRQVQVSMEYSRKVPMADGSTAPTGPADTRVMGFGSVFLL
SQGKDSEDVSPAPLPAGGQQPGVNVAELIIARGFGAVIRHRDFEERSNYYENLLAAESRA
TAGRKGIHSSKDPPVMHVMDLLTASAKKAKDFLPFLQRNRRMSAVVEYVLSGHRFKLFVP
KETCSIAFSFSGVRCPGREEPYSNEAISLMRWKIMQRDVEIEVETVDRTGTFLGSLWESK
TNVAITLLEAGLARLQTSFGTDRIPDAHLLAQAEQFAKRQKLKIWENYVEGEQISNDPAH
DRKQKEEFKVMVTEVLGGGKFYVQAVADQKVASIQKQLASLNLKEAPVLGSFSPKKGDIV
LAQFTADNSWNRAMIVTAPRGGVQSAKDRFEVFYIDYGNQEVVAYNNLRPLDPSVSSAPG
IAQLCSLVYLKVPTLDEDYGQEAAMLLSDTTLNGPKEFRAVIEEKDTSGGKVKGQGTGNV
LLVTLIDDESGKSVNAMMLKEGVARLEKRRRWEPKEKQEAMNELEKHQSEAHRQRLGMWE
YGDIQSDDDENPPPIKKTGAGKR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcagcagcaagttcgggatggttgagaggaagagtgaaagctgctccatct
ggtgataccttggtgattatgggatttaccaaagctgaaatacccccagagaagactatc
gttttggctcatctttcatccccaagattggcccgtagaggaggcaatgatgacccgttt
gcatgggaaagcagagaattcttacgaaagttgtgtataggaaaggatgttgttttcaaa
acggaatacacaatcccaaatttctcccgagaattttgcagtcttttcgttggtactaca
aatattgcgaaggaggttgttactcatggctgggcgaaggttaaagaggctaaaggagag
gtgactcctgagcatgctgaattgctacgccttgaagaacaagccaggcaacagggaata
ggtctatggaacagggctcccggtgcttctgcagcagccatcaggaatcttccaccctca
tctgttggtgacccaagcaatttagatgcaatggggctcttagctgcaaacaaaggcaga
cccatggaagcaattgtagagcaagttcgtgatgggagctcgcttcgtgtttatctgctt
ccagagtttcagtttgtccaagtgtttgttgctggaatccaggcaccttcaatgggaaga
aggacaatggctgaacctactgcaacaactgaggtaccctctgatgaacccaatggagaa
actaatggcgagattcgtggcaccttaacatcggcacagagagttacagcttcgtcagcc
tacaatgaagttgcccctgatccgtatggaagggaagctaaacattttactgagattcgc
gtactaaatagagatgtccggattgttctggagggcgttgacaagtttagcaatttaata
ggttccgtctattaccctgacggtgaagcagcaaaggacctcgcactggagcttattgaa
aatgggtttgccaagtatgttgagtggagtgcaatcatgatggaagatgaagccaggagg
aagttgaaggctgcagaacttcaagcaaagaagagtaagttgaggctctggacaaattat
gtacccccagctacaaattcaaaggcaatttcagatagtttcactggagaggtggttgaa
gttgttagtggagactgcatcattgttgctgatgatgctgtaccatttggcagtccagca
gcagagcgacgagtaaacctgtcaagcatcaggtgtcccaaactgggaaatccccgaaga
gacgaaaagcctgctccttatgcccgtgaagcaagggaatttctaagaacacgcttaatt
ggccgtcaggtacaagtttcaatggaatactctcgaaaggtccccatggccgatggatcc
actgctccaactgggcctgcagatacaagagtaatgggctttggatcagtcttcctgttg
tctcaagggaaggatagcgaggatgtctcgcccgctcccctccctgcaggtgggcagcag
cctggtgtgaatgttgctgaactcattattgcccgtggctttggcgctgtcattagacac
agagatttcgaggaaagatcgaattactatgagaatcttcttgctgctgaatcacgcgct
actgctgggaggaaggggatacattcttccaaagatcctccagttatgcatgtcatggat
ctcttgacggcatcagcaaaaaaagccaaagatttccttccatttctacaacgtaaccgg
aggatgtcagctgttgttgaatatgtccttagtggccatcggtttaaactgtttgttcct
aaggaaacctgcagcattgctttctctttctccggtgtcagatgccctggtcgtgaggag
ccttattccaatgaagctatatcacttatgagatggaaaataatgcagagggatgttgag
attgaagtagaaactgttgatagaaccggtacattcttgggttcgttatgggaatcaaaa
actaatgtcgctatcacccttctggaagctggccttgcaagacttcagacttcctttgga
actgatagaattccagatgctcaccttcttgctcaagcggagcagtttgccaagagacag
aaattgaagatatgggaaaactatgtcgaaggagagcaaatttccaacgatccagctcat
gatagaaaacagaaagaagaatttaaggtgatggtcactgaggtccttggtggcggcaag
ttttacgtccaagcagttgctgatcagaaagttgcttccattcaaaagcaacttgcttct
ttaaatctcaaagaagctccagtgcttggctcattcagtccaaagaagggcgatattgtc
cttgctcagtttactgcagataattcgtggaaccgagcaatgattgtaactgctccacgt
ggtggtgttcaatcagctaaagacagatttgaagttttttacatcgattatggaaatcaa
gaagttgttgcgtataacaacttgcgtcctctggatccatcagtatcgtctgcacctggg
attgctcaactttgcagcctcgtgtacctaaaggttccgacattggatgaggattacggt
caggaagcagctatgcttctaagtgacaccacactcaatggtccaaaggaattcagagcc
gtgatcgaggaaaaggatacatctggcggaaaagttaaaggccaaggaactgggaacgtt
ctcttggtaactttgatcgatgacgaatctggtaagagtgtcaatgccatgatgctgaag
gaaggagtagcaagattagagaaaagaaggagatgggaacctaaagagaaacaagaagcc
atgaatgaattagaaaaacaccaatcagaagcacatagacagcggttggggatgtgggag
tacggcgatatccagtccgacgatgacgagaatcctccgcccattaagaaaaccggtgcc
ggtaaacgctaa
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