Cynara cardunculus var. scolymus (artichoke): 112511770
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Entry
112511770 CDS
T05604
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112511770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112511770
03036 Chromosome and associated proteins [BR:
ccav03036
]
112511770
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112511770
Coactivators
SAGA/TFTC/STAGA complex
112511770
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112511770
STAGA complex
112511770
TFTC complex
112511770
SAGA complex
112511770
SLIK complex
112511770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
112511770
NCBI-ProteinID:
XP_024973280
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All DBs
Position
LG_4
Genome browser
AA seq
593 aa
AA seq
DB search
MMADNSSSSPIQSTITNATTPMDQQQPHQSISQNLPSSIDSSINQITSTPSLSSQQQQIP
QVSSSNVLSQQQQLLQQQQQQQQSNLMTTPNFQIHQQGLQRSPSMSRLNHMQQQQQQQQQ
YNLTAGNAARIYGQMNFASSQQQLPQQQQQQQQTQNQQIGQMGNATLTRSALMGQTGHLT
MLPGQAAAAAQLNLQSQLLASPRQKAGLVQGSQFHPGNTPGQSLQGIQMGMNMMGSYNLN
SQIRANGSLAFTQQRINQGQMRPQLTQQNALASSQKLQAQSLSRTSFMNSQLSALGQNGQ
LAMMQNNLTQQQWSKQMPSMSAPNSPSYRFAQQRQQQALLGQQLPSSQLHNSMSLNPQQL
SQMVQHQQQQQQHQQQQQPIGHQQQQLLQQQSPRIAGSAGQKSLSLTGSQPDATASGTTT
PGGSSSQGTEASNHLLGKRKIQDLVAQIDPNATLDPEVEDLLLMLADEFIDSVTTFGATL
AKHRNSSIVESKDVLLHLEKNYKLTIPGFSSEERKQEQNHTPSDLHKKRLDLIQGLMENS
YSETNMTNNSKEVVVTRQDHPRNQFGGNQQSRPSPSSDQLNPHSQHKQGFDGY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggataattcctcctcatccccaattcaatccaccatcaccaacgccaccaca
cccatggatcaacaacaaccacaccaatccatatctcaaaacctcccttcttccatcgac
tccagcattaatcaaatcacctcaaccccatcattatcatcccaacaacaacaaatccca
caagtttcatcatccaacgttctatctcaacaacaacaattacttcaacaacagcaacag
caacagcagagtaatttgatgactacacccaatttccaaatccatcagcaaggtttacag
cgatctccctccatgtcgcgcttgaatcacatgcaacaacaacagcagcagcaacaacag
tacaatttgactgccggtaatgctgccagaatttatgggcagatgaattttgctagcagc
cagcagcagttgccacagcagcagcagcagcagcaacaaacccagaatcaacaaattggt
cagatgggtaatgccaccttaacccgctcagctttgatgggtcaaaccggtcatcttaca
atgttgcccggtcaagctgccgccgctgctcagcttaatttacaatcccaattattagca
tcgccaaggcagaaagctgggttagttcaagggtctcaatttcatccaggaaatacacct
ggacaatcattgcaaggaattcaaatggggatgaatatgatgggatcttacaatttgaat
tctcaaattagggcaaatgggtctcttgctttcacccaacaaaggataaatcaagggcag
atgagaccgcaattgacccagcaaaatgcactagcatctagtcagaaattgcaggcacag
agtctatcgcggacgtcattcatgaactcacaattgtcagcattaggtcaaaatggacaa
ttagctatgatgcaaaataatctaacccaacaacagtggtcaaagcaaatgccatcgatg
tccgcacccaattctccctcatatcgatttgcacaacagaggcaacaacaagcacttttg
ggacaacaacttccttcttctcaattgcacaattctatgtcgttgaatccgcaacagtta
tctcaaatggttcaacatcagcagcagcaacaacaacaccagcagcagcaacaaccaatt
gggcaccaacagcaacagcttttgcagcagcagtcaccaagaattgcaggatcggcaggc
caaaaatctctaagtttgactggatcgcaacctgacgcaactgcatctgggacaaccaca
cctggtggaagttcaagccaagggacagaagccagcaatcatcttctcggtaaaaggaaa
atacaagatttggttgcacagatagatccaaatgcgactttagatcccgaagttgaggat
cttcttttgatgcttgctgatgaatttatcgattcggttactacatttggagctaccttg
gccaaacatcgcaattcatcaattgtggaatcgaaagatgtgttgctacaccttgaaaaa
aactacaaattgacgattcctgggttctcaagtgaagagaggaaacaagaacaaaatcac
accccgagtgatctccacaagaagcgtctggatttgatacaaggactgatggagaactca
tactctgaaacaaacatgactaataattctaaggaagtagtagttactcgacaggaccac
cctcgaaaccaattcggtggcaatcagcagagcagaccttccccgagttcagaccagctc
aaccctcattctcaacacaaacaagggttcgatggctactag
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