Cynara cardunculus var. scolymus (artichoke): 112511865
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Entry
112511865 CDS
T05604
Name
(RefSeq) exocyst complex component SEC3A-like isoform X1
KO
K19983
exocyst complex component 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112511865
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Tethering complex
Exocyst complex
112511865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3_C-term
Sec3_CC
Sec3-PIP2_bind
Vps52_CC
Dor1
DUF2371
DUF2462
Motif
Other DBs
NCBI-GeneID:
112511865
NCBI-ProteinID:
XP_024973456
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All DBs
Position
LG 4:14177263..14192506
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AA seq
892 aa
AA seq
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MAKSSADDLELRRACEVAIEATKQKVVLSIRVAKSRGIWGKTGKIGKGQMAKPRVLAVST
KEKVQQTKAFLHVLKYSNGGVLEPAKLYKLKHLSKVEVLTNDPSGCTFMLGFDNLRSQSV
APPQWTMRNIDDRNRLLLYILNICKDILGHLPKVVGIDVVEMALWAKENTPAVPKKQNIQ
DGHDMDVVAESDMKVTVEKELVSQAEEEDMEALLGVYVMGIGEAEAFSERLKRELHALEA
ANVHAILESEPLVDEVLQGLEAATICVDDMDEWLGIFNVKLRHMREDIESIETRNNQLEM
QSVNNKALIEELDKLLERLRIPSEYAACLTGGSFDEARMLQNIEACEWLTGALRSLEAPS
LDPSYASIRAVREKRAELDKLKTTFVRRASEFLRNYFASLVDFMISDKSYFSQDLCSPVA
TLEGQLTYKLQLSILMFFLLTNIMFRILFTCYVQSLDKNCLGPLRKAYCSSLNLLLRREA
REFANELRASTKASRNPTVWLEGSTGSNQNVNNADTSTVSEAYAKMLTIFIPLLVDESSF
FSHFMCFGVSALAPPGSPANGDKSNDDDLGIMDIDDNDNNKSISELGALNESLRDLLDGI
QEDFYAVVDWAYKIDPLRCISMHGITERYISGQKADAAGYVRLLLDALEERITAQFTRFV
DEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYIKFIGVMFATL
DKIAQTDPKYADIILLENYAAFQNSLYDLANVVPTLAKFYHQASESYEQACTRHISVIIY
YQFERLFQFARRIEDLMYTITPEEIPFQLGLSKMDLRKVVKSSLSGVDKHIGAMYKKLQK
NLTSEELLPSLWDKCKKEYLDKYDSFAQLVAKIYPTETIPSVTEIRDLLATM
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgagcgccgacgatcttgaactccggcgtgcctgtgaagttgcaattgag
gccaccaagcagaaggttgtattgtcgatccgggttgccaaaagccgtggtatttggggc
aaaacaggcaaaataggcaaagggcagatggctaaacctagggtccttgcagtctctaca
aaagaaaaagtccaacaaactaaggcctttcttcatgtcttgaagtattcaaatggagga
gttcttgagcctgcaaaattatacaagctgaagcatctttcaaaggtggaagttttaact
aatgatcctagtggatgcacatttatgctgggttttgataatcttagaagccagagtgtt
gctcctcctcagtggaccatgagaaatattgacgacaggaaccgtctcttgctctacata
ttaaacatatgtaaagacatattgggccatctaccaaaagttgtaggtattgatgtagtg
gagatggctctttgggccaaggaaaatactcctgcagttcctaagaaacaaaatattcaa
gatggccatgacatggatgttgttgcagaaagtgacatgaaggttacagttgaaaaagaa
cttgtttctcaagcagaagaagaggacatggaagctcttttaggcgtatacgttatgggt
attggcgaagcagaagccttttctgaaaggttaaaacgtgagcttcatgctttggaagca
gcaaatgtgcatgccattcttgaaagcgagcccttggtcgacgaggtattgcaggggctt
gaggccgccacaatctgtgttgatgacatggatgaatggctggggatttttaatgtaaaa
cttagacatatgcgagaggacattgagtcgatagaaacacgcaataaccagctggagatg
caatccgtaaataataaagctttaattgaggaactggataagcttcttgagaggctgcgt
attccttcagagtatgcagcatgtctaacaggaggctccttcgacgaggctcgcatgctt
caaaatatcgaagcatgtgaatggttaacaggtgctttacgtagccttgaagcacctagt
ttggacccaagttatgcaagtattagagcggtaagggaaaagagggcagaacttgacaaa
ttaaaaactacttttgttcggagagcctctgagtttttgagaaactattttgctagtttg
gttgatttcatgataagcgataaaagttacttctctcaggacttatgctcgcctgttgca
acacttgaaggtcaattgacatacaagctacaattatcgattttaatgttttttctactt
actaatattatgttcagaatcttatttacttgttatgtgcagagtcttgataaaaattgt
ttgggtcctttgaggaaagcttattgtagctcccttaatctgcttttacggcgtgaggct
cgtgaatttgctaatgagcttcgagctagtaccaaagcatcaagaaatccaactgtctgg
cttgaaggttccactggttccaatcaaaatgtaaacaatgcagatacttccacagtttca
gaagcttatgccaagatgctcacaatatttatcccactccttgttgatgagagttccttt
ttttcacacttcatgtgctttggagtttctgcacttgctccacctggaagtcctgccaat
ggcgacaaatccaatgatgatgatttaggcattatggacattgatgataatgacaacaac
aaaagtatatcagagctaggggcactaaatgagtcgcttcgtgatttgctcgatgggatt
caagaggatttttacgcggttgtcgattgggcatacaagattgatcctttgcggtgcata
tcaatgcatggcataacagaacggtatatttctggtcagaaagcggatgcagccggatat
gtgcgcctcttgcttgatgcgctggaagaaagaatcactgctcaatttacccgttttgta
gatgaagcttgccaccagatagaaaggaatgaacgaaatgttcggcaaatgggtgtcttg
tcatacattcccagatttgcgacccttgctacacgcatggaacagtatatccagggacag
tctagagatctggttgatcaagcatacattaagtttattggtgtgatgtttgcaactctg
gacaagattgctcaaacagacccaaaatatgctgatattatacttttagagaactatgct
gcattccaaaacagcctgtatgacctagctaatgttgtacccactttagctaagttttat
catcaagcaagcgaatcttatgaacaagcttgcacacgtcatatcagtgtgattatatac
taccaatttgagcgacttttccagtttgctcgaagaatagaagatttgatgtacaccatc
acgccggaagagattccttttcagcttggactgtcaaaaatggatcttaggaaggtggtg
aaatcaagtttatcaggagtcgacaagcacataggtgcaatgtacaaaaaactgcagaag
aacttgacctctgaggaattattaccttcgctatgggataaatgcaagaaagaatacttg
gacaagtatgacagctttgctcaactggtggccaagatctacccaaccgagaccattcca
tccgtaacagaaatccgagaccttttagccacaatgtaa
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