Cynara cardunculus var. scolymus (artichoke): 112511901
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Entry
112511901 CDS
T05604
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112511901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112511901
Ion channels [BR:
ccav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112511901
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GFIT
Motif
Pfam:
Ion_trans
zf-4CXXC_R1
DUF6525
Motif
Other DBs
NCBI-GeneID:
112511901
NCBI-ProteinID:
XP_024973474
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Position
LG 1:45389576..45415289
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AA seq
768 aa
AA seq
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MDAVEKDDMPMLTDTDWPSDRNEDNSQRRLSRRSKSVSISIPVSSFELDSSATSLVGFTG
PLCCGRKTPRRQRQGNPSQSIHGTIGFERREPVEQENIIMLNHQRGDHDNEAKNEHLLRS
GQLGMCNDPYCTTCPSSYNYKELLKNSRQTFGIGTELHDVLHGGATGWARKKLSLLKHFI
FGVMNPHAKVVQQWNQFIVISCLLAIFIDPLFFYLLLTDKVHKCIVINWPMTQTIVVFRS
MTDLIYLTHMLVQFRLAFISPESRVVGAGDLVDHPKEIALHYLSGFFFLDLFIVLPLPQM
IVLFILPKAIASSGANYAKNLLRSSVLVQYLPRLYRFLPLLAGQSPSGFIFESAWANFII
NLLTFVLSGHVVGSCWYLLGLQRVNQCLRDACHNSGIESCMKFLDCGHGTDFQKFEVDPN
WKSWKDNGNSSACFSEGGFPYGIYVKAVNLTTENSIITRYVYSFFWGFQQISTLAGNQTP
SYFVWEVLFTMGIIGLGLLLFALLIGNMQNFLQGLGRRRLEMSLRRRDVEQWMSHRRLPE
DLRRKVRESERYNWAATRGVNEERLMENLPEDVQRDIRRHLFEFVKKVRIFALMDEPILD
AICERLRQKTYIKGGKTLYQGGLVTKMVFIVRGKMESMGEDGNKVPLSEGDVCGEELLRW
CLEDSSVNGDARNHTQPRYRLRSNRTVKCLTNVEAFVLRAADLEEVTSLFAGFLRNHRVQ
IAIRNESPYWRGLAATTIQVAWRYRKKRLSHTHTSRGGILFRPSWISR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgttgaaaaagatgatatgccaatgttaaccgatacagactggccatccgat
agaaatgaggataactcacagcgaaggttgtcacgcaggagcaaaagtgtttcaatatcc
atcccagtgagctcatttgagttggattccagtgcaacaagtcttgttggctttacaggt
cccttgtgttgtggaagaaaaactccacgtagacagagacaagggaatccctcacagtcc
atccatggtaccataggctttgaaaggagagagcctgtggaacaagaaaacattataatg
cttaatcatcagaggggagatcatgataatgaagcaaaaaatgaacacttattgaggtca
ggacaattggggatgtgcaatgatccttactgtacaacatgcccaagttcttacaattac
aaggaactgctgaagaactcaagacaaacatttgggattggaacagagcttcatgatgtt
ctgcatggaggtgcaacggggtgggcaagaaaaaagttatccttgctgaagcattttata
tttggggtcatgaatccacatgccaaagttgttcagcagtggaaccaattcattgtcatt
tcttgcttattggccattttcatagaccccttattcttttacttgctgttaacagataag
gttcataagtgcatagtaattaattggcctatgacgcaaaccattgtggttttcagaagc
atgacggaccttatttacctcacgcacatgctagttcagttcaggttagcattcatttca
cctgaatcaagagttgtgggtgctggagacttggttgaccatcctaaagaaattgcgtta
cattatctttccggattttttttcctcgacttatttattgtattaccacttcctcagatg
atagtattatttattctaccaaaggccattgcatcatctggagctaattatgcaaagaat
ctgttgcgatcatctgttctggttcagtaccttcccagattataccgatttctgcctctt
cttgctggccagtctccaagtggtttcatatttgagtcggcgtgggcgaactttatcatc
aatcttctgacttttgtcttgtctggtcatgttgttgggtcatgctggtatcttcttggg
ttacagagagtgaatcaatgccttcgagatgcttgtcataactctggaatcgaatcttgc
atgaagtttctagactgtgggcatgggactgattttcagaaatttgaagtggacccaaat
tggaaaagctggaaggacaatggaaattccagtgcttgttttagtgaaggtggtttcccc
tatggaatttatgtgaaagctgtcaatctcaccaccgaaaatagcataatcacaagatat
gtctactcctttttttgggggtttcagcaaattagcacactggctggcaatcaaactcca
agttattttgtgtgggaagttctatttactatgggcatcattgggcttggacttctgctt
tttgcgcttcttattggaaacatgcaaaactttcttcaaggtctcggacgcaggcggctt
gagatgtcacttagacgacgtgatgttgagcagtggatgagccaccgacgcttgccagaa
gacctacgaagaaaagttcgagagtcggagcgttataattgggctgctacccgaggggtt
aatgaagaaaggctaatggagaatttgcctgaagacgtgcaaagagacatacgccggcat
ctctttgagtttgtcaagaaagtccgaatttttgcactaatggatgaaccaattttagat
gcaatatgtgaaaggttaaggcaaaagacatacatcaaaggaggaaaaactttatatcaa
ggagggcttgtgacgaagatggtttttatagtaagagggaagatggagagcatgggtgaa
gatggtaataaagttccactgtcggagggtgatgtgtgtggcgaagaacttctaagatgg
tgccttgaagattcctctgttaatggagatgcaagaaatcatacacaaccaagatacaga
ttacgtagcaacaggacggtgaaatgcttaacaaatgttgaggcctttgtgcttcgggct
gcagatcttgaagaagtcaccagcctttttgctggtttcttgaggaatcatcgtgttcag
attgccataaggaacgagtctccgtactggcgaggcttggcggcaaccaccatccaggtg
gcatggagatacaggaagaagcggctaagtcatacacacacctcacgtggtggtatactc
tttcgtcctagttggattagccgctag
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