Cynara cardunculus var. scolymus (artichoke): 112511958
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Entry
112511958 CDS
T05604
Name
(RefSeq) probable auxin efflux carrier component 1c isoform X1
KO
K13947
auxin efflux carrier family protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112511958
Transporters [BR:
ccav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
112511958
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Gene cluster
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
112511958
NCBI-ProteinID:
XP_024973485
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Position
LG 1:46404064..46411184
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AA seq
598 aa
AA seq
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MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS
TNDPYKMNLRFIAADTLQKLVVLAVLAVWSNLSKRGCLEWSITLFSLSTLPNTLVMGIPL
LKGMYGGDSGSLMVQIVVLQCIIWYTLMLFLFEFRGARLLISEQFPDTAGEIASIHVDSD
IMSLDGRQVLETEAEIKEDGKLHITVRKSNASRSDVFSRRSQGFSSTTPRPSNLTNAEIY
SLQSSRNPTPRGSSFNHNDFYSMAGGGRNSNFGANDVYGLSVSRGPTPRPSNYEEEGGGS
TANKSRFHHGVLGGNYPAPNPGMFSPSTGKTVPPTLKKANGQKAEEGSNDLHMFVWSSSA
SPVSDVFAAREYGTLDPQTTKDVKPPISPVKSHGEEYLPRDEFTFGNNINIEGGKGKGGG
GGKSGVKTMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSFRWDVKMPAIIEKS
ISILSDAGLGMAMFSLGLFMALQPRIIACGNSVAAFAMAVRFLTGPAVMAAASIAVGLRG
VLLRIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYIFLGLGK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgattagtctctcagacttctaccacgtcatgacggccgtcgtccctctctacgtcgcc
atgatcttagcttacggctccgtcaaatggtggaagatcttcacccccgatcaatgctcc
ggcatcaaccgtttcgtcgccctcttcgccgtccctcttctctccttccacttcatctcc
accaacgatccttacaaaatgaacctccgtttcatcgccgccgataccctccagaaactg
gtggtgctggcggtgctcgccgtctggagcaacctcagtaaaaggggctgtttagaatgg
tcgatcacgctcttttcattatcgacgcttccgaacacactggttatgggcattcctttg
cttaaaggaatgtatggtggtgattccggtagcttaatggttcagatcgttgttcttcaa
tgcattatttggtatactttgatgctgtttttgttcgagtttcgcggtgcgagattgttg
atttcggagcagtttccggataccgcgggcgagattgcttcgattcatgtcgattcggat
attatgtcgttggacgggcggcaggtgttggagacggaggcggagattaaggaggacggg
aagcttcatatcaccgtccggaaatcgaacgcgtcgagatcggacgtgttttcgaggcgg
tcgcaagggttctcgtcgaccactccgcgtccgtcgaatcttacgaatgcggagatatat
tctctgcagtcgtcgagaaacccgaccccaagagggtcgagtttcaaccataatgatttt
tattccatggcgggcggtgggaggaactcaaactttggggcgaatgatgtttatgggctc
tctgtgtccagagggcccacgccacgaccttccaactatgaagaggaaggcggtggaagc
accgctaacaagtctcgtttccatcacggggtgctgggtggtaactacccagcacctaat
ccggggatgttttctccatcaacaggaaaaacagttcctccgacactaaaaaaagccaac
ggacaaaaagcagaagaaggttcgaatgatctacacatgttcgtctggagctcgagtgct
tctccggtttccgacgtgttcgcagctcgggaatacggaaccctcgacccgcaaactaca
aaagacgtaaaaccgccgatatcgccagtaaaaagtcacggagaagagtacttgcccaga
gacgagtttactttcggaaataacataaacatcgaaggcgggaagggcaaaggcggtggc
ggcggcaagagtggcgtcaagacgatgccgccaacgagcgtcatgacgaggctcatattg
atcatggtgtggaggaaactaatccgaaacccgaatacgtattcaagtttgatcggtctc
atttggtctctagtatcgttcaggtgggatgtaaagatgcctgcgatcatcgagaagtcg
atatcaattctatcggatgcaggtcttggcatggcgatgttcagtctcggattgttcatg
gcattacaaccgaggatcatagcatgtggaaattcggtggcagcttttgcaatggccgtg
agattccttacaggaccagctgtcatggcagctgcttccattgccgttggacttcgcggc
gtcctcttacgcattgctatcgttcaggcagctttaccacaggggattgtcccctttgtg
ttcgccaaggagtacaatgtccaccctgatatccttagcactggggttatattcggaatg
ttgatagcattacccattacgctcgtctactacattttcctcgggctcgggaaatag
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