Cynara cardunculus var. scolymus (artichoke): 112512012
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Entry
112512012 CDS
T05604
Name
(RefSeq) scarecrow-like protein 14
KO
K27753
GRAS family protein LISCL
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112512012
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
GRAS
112512012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF2642
DUF7338
Motif
Other DBs
NCBI-GeneID:
112512012
NCBI-ProteinID:
XP_024973552
LinkDB
All DBs
Position
LG 5:5315262..5318938
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AA seq
742 aa
AA seq
DB search
MIMEPGHDEFTDYVNGLSLDESIFPVFGQSPGITNGYRFRDEPLDLSFLELPDPTPNSGP
CTSDLSSCRSSNFDSPDEFADCVFKYINQILVEEDMEARQSMFHDPLALQATEKSFYEAL
GKNYPPPVLNVESPEENFFSSSSEYSTNSSTSGSNSTDSHWPGGDSLETKSPVAQTPSLE
YPLLSSFGSTTSITNDGFSTMDSLINTHLVENIFTNSESIMQFNRGKEEASKFLPPSKPL
VIDLDKYNLPSNSRDASPEVVVKEEIVEMDISSSGFRGRKHYQLEDNVYEEERRSKQSAV
YVEEAELSEMFDRVVLCTDPGGPSMSACEEPPRHVKKKMQQNGQAYGYSSGWITRSWGQG
SSGEAMDVRTLLVNCAQSVAADDRVTANEQLKQIRQHASPLGDAPQRLAHIFATGLEARL
AGTGSQLYANKTALTISAAEKLKAYQVYLAACPFKKIAIFFANKMIYEAAATSSTLHIVD
FGIAYGFQWPVLIKHLAERPGGPPKLRITGIELPRPGFRPAEGVEETGRRLANYCERFKV
PFEYNAIATQNWETVKIEDLKLQRNECLAVNTLIRFKNLLDDTVVVNSPRDSVLKMIRDM
KPDIFVQTVVNGSYSSPFFVTRFKEALFHFSSMFDMFDATLDREDEQRLNFEKEFCGREA
MNVIACEGAERVERPETYKQWQVRNSRAGFKLKPLNRELVSKLRAKVRAGYHKDFVFDED
GKWVLQGWKGRILRASSCWVPA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattatggaacctggacacgatgaattcactgattacgttaatggtttatctttagat
gagagtatcttccccgtctttggtcagtctcctgggattaccaatggatacagattcaga
gatgaacctttagacctcagtttcttagaacttcctgacccaacaccaaattccggtccc
tgtacttcagatctatcttcgtgcaggtcctcaaattttgattcccccgatgagtttgct
gattgtgtttttaagtacataaaccaaatccttgtggaagaggatatggaggctagacag
agtatgttccatgaccccttagcgctacaagcaaccgaaaaatcgttctatgaagccctt
ggtaagaattaccctcctcctgttttaaatgttgaaagccctgaagaaaactttttcagt
agctcaagtgagtacagtacaaacagtagcacaagtggtagcaactccaccgattctcac
tggcctggtggggattcccttgagaccaaatcaccagttgcacaaactccgtctcttgaa
taccctttgttgtcgtcatttggctctaccactagcattactaatgatggttttagcaca
atggattcactgataaacacacacctcgttgagaacatattcaccaatagcgagtctatc
atgcagttcaatagaggtaaggaggaagctagtaaattccttccccctagtaaaccttta
gttattgacttggataaatacaacttgccttcgaattcaagagatgcttctccagaggtt
gttgtcaaggaggagattgtagagatggatatctcatccagtgggttcaggggaaggaag
cattatcaactggaggataatgtttatgaggaagaaaggaggagcaagcagtctgctgtt
tatgtggaagaggccgagttatcagagatgtttgatagagttgttctctgtactgatccc
ggaggtccgtccatgtctgcttgtgaagaacctcctaggcatgtaaagaaaaaaatgcag
caaaatggacaagcatatgggtatagtagtggttggattactcgttcttggggacaagga
agttcaggtgaagctatggatgtcaggactctgttggtgaactgtgcgcagtcagttgct
gctgatgatcgtgtgactgcaaatgaacaattgaaacagataagacagcatgcttctcca
ttaggggatgctccacagcggttagctcatatctttgctactggtcttgaggcacgctta
gctggaactggttctcagctttatgcgaataaaactgccttgacaatctcagctgctgaa
aagttgaaagcctatcaggtttatcttgcagcctgccctttcaagaagatcgccattttc
tttgctaataaaatgatatatgaagcagctgcaacatcttccacccttcatattgtagat
tttggtattgcatatggtttccagtggcctgttcttattaagcatcttgcagagagacct
ggtgggccacctaagttgaggattactggaatagagcttccaagacctggttttaggcca
gccgagggggtggaggagacaggacgtcgtttggccaattattgtgagcggtttaaagtt
ccgtttgagtataatgccatagcaactcaaaattgggagactgttaaaattgaagatctc
aagctccagagaaatgagtgccttgctgtgaacactctgattcgattcaagaacttgctt
gacgacacagttgtggtgaacagtccacgagacagtgttttgaagatgattagggatatg
aaacctgatatttttgttcaaactgtagtcaatggctcttatagctctccgttttttgtc
actcgtttcaaggaggccctttttcatttctcttccatgtttgatatgtttgatgctacc
ttagaccgtgaggatgagcaaaggttgaattttgagaaggagttttgtgggcgtgaagct
atgaatgtgattgcatgtgaaggtgctgagagggtggagaggcctgagacctacaagcag
tggcaagtccgaaactcaagagctggattcaagctcaaacccttgaaccgggagcttgtt
tcaaaactgagagccaaggtgagagccgggtatcataaagattttgtgttcgatgaagat
ggcaaatgggtgttacagggatggaagggtcggattctgcgtgctagttcatgttgggta
ccagcctag
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