KEGG   Cynara cardunculus var. scolymus (artichoke): 112512073
Entry
112512073         CDS       T05604                                 
Name
(RefSeq) WD repeat-containing protein 70
  KO
K24752  WD repeat-containing protein 70
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112512073
   03036 Chromosome and associated proteins [BR:ccav03036]
    112512073
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112512073
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112512073
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    112512073
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     112512073
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st WD40_RFWD3 PEP5_VPS11_N Cytochrom_D1
Other DBs
NCBI-GeneID: 112512073
NCBI-ProteinID: XP_024973637
LinkDB
Position
LG 5:2342999..2352271
AA seq 643 aa
MEDDPESFDGIRAHFPLSFGKKTKSQISTESIHNATRRPSTTTVVDDSPSSSSLPTDNKN
NDTVFPSLSTSSKSWLNSLQKPPKKLSTVSDDDVAIGPPRPPPSSDSVDGEDDVMVGPPR
PMPADDDDDEEEDEEPIIGPPRPPVGSDSDNELSEDEEENQHRIPLSNEIVLKGHTKVVS
ALAIDHSGSRVLSGSYDYSIRMYDFQGMNARLESFRQLEPSEGHQVRSLSWSPSSDRFLC
VTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDG
SLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKSIAGGIGDGSIQIWSLKPGWG
SRPDIYVANGHSDEITGLKFSSDGRILLSRSFDGSLKVWDLRQMKTALKSFEDLPNHYAQ
TNVAFSSDEQLLLTGTSVERDSTTGGLLCLFDRVKLELVSKVGISPTCSVVQCAWHPKLN
QILATAGDKHQGGTHVLYDPTLSTRGALVCVARAPRKKSIDDFQAEPVIHNPHALPLFRD
QPSRKRQREKMLKDPLKSHKPEAPMNGPGFGGRVGVTKGSLLTQYLLKQGGMIKETWMDE
DPREAILKYADVAKKDPKFIAPAYAETQPKTLFAKSDSEDEDK
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggaggatgacccagagagcttcgatggaattagggctcactttcccctttctttcggc
aaaaaaaccaaatcccaaatctctactgaatcaattcacaacgccactcgccgcccatcc
acaaccaccgtcgtcgatgactcaccgtcatctagttcccttcccactgacaacaagaac
aacgacaccgttttcccttcactatccacctcctccaagtcatggttaaattccctccaa
aaaccccctaaaaaactcagtactgtgagcgatgatgatgtggcaattggcccgcctcga
cctccaccgtcttctgattctgttgatggagaagatgatgtgatggttgggcctcctagg
cccatgccagctgatgatgacgatgatgaagaggaggatgaggagccaattatcgggcca
ccacggccgccggtgggttcggatagcgacaatgaattgtcggaagatgaggaagaaaat
caacaccgtatacctcttagcaacgagattgttttgaagggccacaccaaggttgtttcc
gctcttgctattgaccattccggatctcgagtactttccggaagctatgactactcaatt
cgtatgtacgacttccaagggatgaatgctcgtttggaatcatttcgacaacttgaacct
tctgaaggacaccaagttcgtagtttaagttggagtcctagctctgaccgtttcttatgt
gttactggatctgcgcaagctaagatatatgatcgtgatggattgacacttggcgagttt
gtgaaaggtgatatgtatatccgtgacctgaagaatacaaaaggccatataactggattg
acgtgtggagaatggcatccaaagacgaaagagacgattttaacttcatctgaggatggt
tcattgcgtatatgggatgtcaatgactttaaatcccaaaagcaggttataaaacccaaa
cttgcaaggcccggaagggttcctgttaccacttgtgcttgggatcgtgaagggaagtcc
attgcaggaggtatcggtgatgggtctatacagatatggagtcttaagcctggatgggga
agtcggccagacatttatgttgccaatggtcactcggatgaaatcacaggtcttaaattt
tctagcgatggacggatattactctccagaagtttcgatggttccttaaaggtctgggat
ttgcgtcaaatgaaaacggcattgaagtcatttgaggaccttccaaatcactatgcacaa
acgaatgtggcatttagttctgatgagcagcttctattgacgggtacatctgtggaaagg
gatagcacaacgggcgggttgctatgtttgttcgatagagtgaaactcgagcttgtatca
aaagtcgggatatcgcccacatgtagtgtggtgcaatgtgcttggcacccgaagcttaat
cagattttggcgaccgcaggggataaacaccaaggaggaacgcacgtattatacgatcct
acgctcagtactagaggcgctcttgtttgtgttgctcgtgcacctcggaaaaagtctatc
gatgatttccaggccgaacctgtgattcacaaccctcacgcacttccgttatttagagat
caaccgagccgcaagcgccagcgtgagaaaatgttgaaagacccactcaagtctcataag
cccgaagccccaatgaacgggcctggctttggtggacgagtaggtgtaaccaagggaagc
ttattgactcagtaccttctcaagcaaggtggcatgattaaagaaacgtggatggatgaa
gatccaagagaagctattttgaagtatgccgatgtggccaaaaaagatccaaaattcatc
gctccagcttacgccgagactcaacccaaaactctttttgcaaagtctgattccgaggac
gaagataagtga

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