Cynara cardunculus var. scolymus (artichoke): 112512073
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Entry
112512073 CDS
T05604
Name
(RefSeq) WD repeat-containing protein 70
KO
K24752
WD repeat-containing protein 70
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112512073
03036 Chromosome and associated proteins [BR:
ccav03036
]
112512073
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112512073
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112512073
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112512073
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
112512073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
WD40_RFWD3
PEP5_VPS11_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
112512073
NCBI-ProteinID:
XP_024973637
LinkDB
All DBs
Position
LG 5:2342999..2352271
Genome browser
AA seq
643 aa
AA seq
DB search
MEDDPESFDGIRAHFPLSFGKKTKSQISTESIHNATRRPSTTTVVDDSPSSSSLPTDNKN
NDTVFPSLSTSSKSWLNSLQKPPKKLSTVSDDDVAIGPPRPPPSSDSVDGEDDVMVGPPR
PMPADDDDDEEEDEEPIIGPPRPPVGSDSDNELSEDEEENQHRIPLSNEIVLKGHTKVVS
ALAIDHSGSRVLSGSYDYSIRMYDFQGMNARLESFRQLEPSEGHQVRSLSWSPSSDRFLC
VTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDG
SLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKSIAGGIGDGSIQIWSLKPGWG
SRPDIYVANGHSDEITGLKFSSDGRILLSRSFDGSLKVWDLRQMKTALKSFEDLPNHYAQ
TNVAFSSDEQLLLTGTSVERDSTTGGLLCLFDRVKLELVSKVGISPTCSVVQCAWHPKLN
QILATAGDKHQGGTHVLYDPTLSTRGALVCVARAPRKKSIDDFQAEPVIHNPHALPLFRD
QPSRKRQREKMLKDPLKSHKPEAPMNGPGFGGRVGVTKGSLLTQYLLKQGGMIKETWMDE
DPREAILKYADVAKKDPKFIAPAYAETQPKTLFAKSDSEDEDK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacccagagagcttcgatggaattagggctcactttcccctttctttcggc
aaaaaaaccaaatcccaaatctctactgaatcaattcacaacgccactcgccgcccatcc
acaaccaccgtcgtcgatgactcaccgtcatctagttcccttcccactgacaacaagaac
aacgacaccgttttcccttcactatccacctcctccaagtcatggttaaattccctccaa
aaaccccctaaaaaactcagtactgtgagcgatgatgatgtggcaattggcccgcctcga
cctccaccgtcttctgattctgttgatggagaagatgatgtgatggttgggcctcctagg
cccatgccagctgatgatgacgatgatgaagaggaggatgaggagccaattatcgggcca
ccacggccgccggtgggttcggatagcgacaatgaattgtcggaagatgaggaagaaaat
caacaccgtatacctcttagcaacgagattgttttgaagggccacaccaaggttgtttcc
gctcttgctattgaccattccggatctcgagtactttccggaagctatgactactcaatt
cgtatgtacgacttccaagggatgaatgctcgtttggaatcatttcgacaacttgaacct
tctgaaggacaccaagttcgtagtttaagttggagtcctagctctgaccgtttcttatgt
gttactggatctgcgcaagctaagatatatgatcgtgatggattgacacttggcgagttt
gtgaaaggtgatatgtatatccgtgacctgaagaatacaaaaggccatataactggattg
acgtgtggagaatggcatccaaagacgaaagagacgattttaacttcatctgaggatggt
tcattgcgtatatgggatgtcaatgactttaaatcccaaaagcaggttataaaacccaaa
cttgcaaggcccggaagggttcctgttaccacttgtgcttgggatcgtgaagggaagtcc
attgcaggaggtatcggtgatgggtctatacagatatggagtcttaagcctggatgggga
agtcggccagacatttatgttgccaatggtcactcggatgaaatcacaggtcttaaattt
tctagcgatggacggatattactctccagaagtttcgatggttccttaaaggtctgggat
ttgcgtcaaatgaaaacggcattgaagtcatttgaggaccttccaaatcactatgcacaa
acgaatgtggcatttagttctgatgagcagcttctattgacgggtacatctgtggaaagg
gatagcacaacgggcgggttgctatgtttgttcgatagagtgaaactcgagcttgtatca
aaagtcgggatatcgcccacatgtagtgtggtgcaatgtgcttggcacccgaagcttaat
cagattttggcgaccgcaggggataaacaccaaggaggaacgcacgtattatacgatcct
acgctcagtactagaggcgctcttgtttgtgttgctcgtgcacctcggaaaaagtctatc
gatgatttccaggccgaacctgtgattcacaaccctcacgcacttccgttatttagagat
caaccgagccgcaagcgccagcgtgagaaaatgttgaaagacccactcaagtctcataag
cccgaagccccaatgaacgggcctggctttggtggacgagtaggtgtaaccaagggaagc
ttattgactcagtaccttctcaagcaaggtggcatgattaaagaaacgtggatggatgaa
gatccaagagaagctattttgaagtatgccgatgtggccaaaaaagatccaaaattcatc
gctccagcttacgccgagactcaacccaaaactctttttgcaaagtctgattccgaggac
gaagataagtga
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