Cynara cardunculus var. scolymus (artichoke): 112512098
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Entry
112512098 CDS
T05604
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112512098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112512098
03051 Proteasome [BR:
ccav03051
]
112512098
Membrane trafficking [BR:
ccav04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112512098
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112512098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
UBA_7
Rad60-SLD_2
XPC-binding
Dsc3_N
TBK1_ULD
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
112512098
NCBI-ProteinID:
XP_024973674
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Position
LG 5:27534936..27546917
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AA seq
548 aa
AA seq
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MGGGGEGSDGVVIDGIEVKKADGGDAVTVNIRCSSGTKFSVQVSLESSVESFKSVLAQNC
DIPAEQQRLIYKGRILKDDQTLKSYGLEAEHTVHLVRGFVPAASNNSAGTATTRAPNITP
SVARGVGSIEEGMMGGAGASLFSTLGLNGLGGNGGMSGAGLPELEQIQQQLTQNPNMMRD
IMDLPLVQNLMNNPDVIRNMMMSNPQMRDIIDRNPELAHMLNDPAILRQTMEAARNPELM
REMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMGGDTRNDLSSNPFAALLGA
QGGRDQLNSPTTAGAETTTGSPAPNANPLPNPWAAGAGGNQRNATATRPPGTDRSTSPVS
LGGLGIPGLEGILGSTPDPSAMSQLMQNPAISQMMQSLLSNPQYMNQMLGANSQMLNPQL
REMMQNPDFIRHMTSPETMQQMMALQQSLFSQLGRQQSTGDVGQTGGGTGAPANIGLDML
RNMFNGLGTGGFTTPNNSNVPPEERYATQLAQLQEMGFFDTRENLQALTATAGNVHAAVE
RLLGNPGQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggaggcgagggtagtgatggtgttgtcatcgatggaattgaagtgaagaag
gctgacggtggtgacgctgttactgttaacatacgatgttctagcggcacgaagttctcc
gttcaggtgagcctcgagtcgtctgttgaatcattcaagtctgtgcttgcacagaactgt
gatatccctgcggaacagcagcgtttgatttataaaggccgcattcttaaagacgatcag
actcttaagagctacggtttggaggcagagcacactgttcatttggttcgtggttttgta
cctgctgcatcaaataattccgcaggtacagcgactaccagagctccaaatatcacccca
tctgttgcaaggggagttggttcaattgaagagggaatgatgggtggagctggtgcttca
ttattttctacacttggtttgaatggtttgggaggcaatggtgggatgtctggggctgga
cttccagaacttgaacagatacagcaacagttaactcagaaccccaacatgatgcgagat
atcatggatctgcctcttgttcagaacctaatgaataatccagatgttatacgcaacatg
atgatgagtaatcctcaaatgcgtgatattattgataggaatccagagcttgcccacatg
ctcaatgatcctgccattctccgtcagacgatggaggctgcaagaaatcctgaactcatg
cgtgaaatgatgcgcaacacagacagagcaatgagtaatattgaatcttctcctgaagga
tttaacatgcttaggcgtatgtacgaaaatgttcaggagcctttcctgaatgcaactaca
atgggtggggatacgaggaatgatttgagttcaaatccatttgcagctctcttgggtgcc
caaggggggcgtgatcagttgaatagtcctacgactgcgggtgctgaaacaactacaggt
tcccctgctcctaatgccaatcctcttcccaatccttgggctgctggtgctggaggtaac
caaaggaatgctactgcaacacgtcctcctgggactgataggtccacatcacctgttagc
ttaggtggacttggaattccaggtctagaaggaatattaggttccacccctgaccccagt
gcaatgagtcagcttatgcaaaatccagctatttcacagatgatgcagagtctcctttca
aacccacagtatatgaatcagatgcttggcgcgaactcacagatgctcaatccccagttg
agagagatgatgcaaaaccctgacttcattcgtcacatgacttcacctgagaccatgcag
caaatgatggcactgcagcagtctcttttctcccaacttggtcggcaacaaagcaccggg
gatgtgggtcaaacgggtggaggaacaggtgctcctgctaacattggactagatatgctg
agaaacatgtttaatggactgggaacaggaggcttcactacacccaacaactctaacgtg
cctccagaagaacggtatgccacccaacttgcacagctacaagaaatggggttttttgat
acccgtgagaatcttcaagcactcactgccactgctggtaacgttcatgctgcggttgaa
cggctgttgggaaatcccggtcaatag
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