Cynara cardunculus var. scolymus (artichoke): 112512139
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Entry
112512139 CDS
T05604
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112512139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112512139
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112512139
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
112512139
NCBI-ProteinID:
XP_024973754
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All DBs
Position
LG 5:complement(522712..526557)
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AA seq
160 aa
AA seq
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MRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSS
RSRSRSRSRSKSYSRSRSRSRSKSPKAKSSRRSKSRSRSASPRSRSGSEPRPSARSPSRS
RSPPPSRPKRVSKSPKRRSPSKSRSPSRSRSRSRSKSLSR
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgagctggggatgtttgcttctcccaagtttttaaggagggaggtggcaccacc
gggattgtggactacacaaactatgatgacatgaaatatgctataaggaaattggatgac
tctgagttccggaatgctttctctcgcggagttatacgtgtgaaggagtatgattctagc
cgctctaggagccgtagtcgcagccggagcaagagctatagccgtagtcgcagcagaagc
cgaagcaaatccccaaaagcaaaatcttctcgccgctcaaaatcccgttcgaggtctgct
tctcctcgttctcgttctggatcagaaccccgcccatctgcaagatctccttcaagatcc
agatctccgccaccttctcgcccaaagcgggttagtaaaagtcccaaaagacgcagtcct
agtaagagcaggagtccgagcagaagcaggagtcgtagcaggagcaagagtttatcacgg
tga
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