Cynara cardunculus var. scolymus (artichoke): 112512154
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Entry
112512154 CDS
T05604
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00280
Valine, leucine and isoleucine degradation
ccav01100
Metabolic pathways
Module
ccav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112512154
Enzymes [BR:
ccav01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
112512154
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_D23
NQRA_N
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
RnfC_N
Motif
Other DBs
NCBI-GeneID:
112512154
NCBI-ProteinID:
XP_024973780
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Position
LG 5:1333238..1348801
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AA seq
739 aa
AA seq
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MSMASIIYRKLHRKSKNRFNYIQVRFASPATDLSNNEKSNRKIEKLLIANRGEIACRIMR
TAKRLGIQTVAVYSDADRYSLHVKSADEAVRIGPPPARLSYLNASSIIEAAVRTGAQAIH
PGYGFLSENADFAQLCENEGFTFVGPPASSIREMGDKSASKRIMGAAGVPLVPGYHGHEQ
DIDVMKSEAEKIGYPVLIKPTHGGGGKGMRIVQSPKEFVDSFLGAQREAAASFGVNTILL
EKYITRPRHIEVQVFGDKQGNVVYLYERDCSVQRRHQKIIEEAPAPDIISDFRSRLGQAA
VSAAKAVGYHNAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANG
ESLPLGQAQIPISGHAFEARIYAENVPRGFLPASGVLQHYRPVPVSASVRVETGVEEGDT
VSMHYDPMIAKLVVWGENRSAALVKLXDSLAKFQVAGLPTNIEFLFKLANHKAFQNGELE
THFIDHFKDDLFVTPSDSXSAKAAYDAAKYSAALVAACICEKEHTLLTKSPPGGLGVWYA
HPPFRLHHHATRTIELEWENEYHDNNSENVTLXISYLPNGNYVIKMGESSFPALEVTVIH
LRDHDFRVEADGISKNVNLASYFKDKTEHIHIWHGSDHHQFKQKVGLDLLDNLETHQHRN
HESATHPPGTVTAPMSGLVIKVLVEDGTEVKEGQPMLVMEAMKMEHVLTAPTSGLVSGLQ
VTXGQQVSDNSVLFKVKAA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggcgtcgattatttaccggaagcttcaccggaaatcgaagaaccgattcaat
tacatacaagtaaggttcgcatccccggcgacggatttaagcaataacgaaaagagtaat
cggaaaatcgagaagttgctgatagcgaacagaggggaaattgcttgtaggattatgaga
acggcgaaaaggctagggatacaaactgttgctgtttatagcgatgctgataggtatagt
cttcatgtgaagtccgccgacgaggccgtacgaattggtccgccgccggctcgattgagt
tatcttaacgcctcttccataatcgaagccgccgtccgtactggtgctcaggctatccat
ccaggctacggttttttatcagaaaatgcagacttcgctcaactktgcgaaaatgaagga
ttcacttttgttggaccacctgcatcttcaatacgtgaaatgggtgataaaagtgcatca
aagagaatcatgggtgcagcaggtgtgccacttgtaccggggtatcatggtcatgaacaa
gatattgatgtcatgaaatcagaagcagagaagatcggataccctgttttaataaagcca
acccatggaggtggaggaaagggtatgaggattgtgcaaagtccaaaagaatttgttgac
tcattcttaggagcacaacgtgaggctgctgcttcttttggtgtaaacacaattttgttg
gagaaatatataacaaggccaaggcatatagaagtccaggtgtttggggacaagcagggc
aacgttgtctacttgtatgagagagattgcagtgtgcagagaagacaccaaaagataatc
gaagaagcaccagctccagatatcattagcgacttccgatcccgcttgggtcaagctgct
gtgtctgctgccaaggcggttggttatcacaatgctggcacagttgagttcattgttgat
actctctctggggaattttattttatggagatgaacacgcgtcttcaggttgaacatcct
gtgactgagatgattgttggtcaagatcttgtagagtggcaaattcgtgttgcaaatgga
gaatcgctcccccttggtcaagcacagattcctatatcagggcatgcttttgaagcccga
atatatgctgaaaatgtgccaagaggatttctgcctgcaagyggagttcttcaacattac
cgtcctgttccagtctcagcaagtgttcgagttgagactggagttgaagaaggggacact
gtaagcatgcattatgaccctatgattgctaagcttgtagtatggggagagaaccgctct
gcagcattagttaaattgarggattctttagccaagtttcaggttgcaggtttgcccaca
aatatcgagtttctcttcaaacttgctaaccacaaggcattccagaatggtgaacttgaa
acccattttatcgatcattttaaagacgacttattcgtgacaccaagtgattcagwatca
gcaaaagcagcatatgatgctgctaaatacagtgcagcgttagtagctgcatgtatttgt
gaaaaggagcacacactattgacgaaaagtccccctggtgggttgggtgtgtggtatgca
catcctccrtttagactccatcatcatgccacacgtacaatagaactagaatgggagaac
gaataccatgataacaactcrgagaacgtgacacttwccatcagttatctgccgaacggg
aattatgtcatcaagatgggggaaagcagctttcctgctcttgaagtcacygtaatacac
ttgagagaccatgatttcagagttgaggctgatgggataagcaagaacgtaaatctggcc
agttatttcaaggataaaactgagcacattcacatatggcatggttcagaccatcatcag
tttaagcaaaaagtggggctcgatctgttggataaccttgaaacccatcaacaccgaaat
catgaatctgcaacccatcctccagggaccgtcaccgcycccatgtccggtctggtcatt
aaggttctagtcgaagatggaacggaagtcaaagaaggacaacctatgttggtcatggaa
gcaatgaaaatggagcatgtgttgacggcaccaacctctggcctcgttagcgggcttcaa
gtcactcmtggccaacaagtttctgacaatagtgttctcttcaaagtcaaggcggcataa
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