Cynara cardunculus var. scolymus (artichoke): 112512178
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Entry
112512178 CDS
T05604
Name
(RefSeq) RAN GTPase-activating protein 2-like
KO
K14319
Ran GTPase-activating protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112512178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112512178
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112512178
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_6
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-GeneID:
112512178
NCBI-ProteinID:
XP_024973809
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Position
LG_5
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AA seq
516 aa
AA seq
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MDSTHGQSTYGHLRSIKLWPPSQTTRQVLVDRIVKNLTTPSILSRKYGLLSKEEAEEDAK
QIESAAFSAANQHFEKEPDSDGASTVQVYARESSKLMVEVVKRGPRPKEDRDIIPDLLSD
HESVFDISGGRRAFIDAEEAKELLKPLKEPENKYTKICFSNRSFGLPAAHVAASILSNLK
NQLTEVDLSDFVSRRPEPEAIEVMRMFSSALEGCDLSYLNLSNNTLGERGIRAFGDLLRS
QENLVELYLMNAGISEEAAKALRELIPSSKKLKILHFHNNMIRDGGAIAISQLVKESPML
EDFRCSLARIGSVGGVALAEALATCTLLKKLDLRDNVFGTEAGIALSRGLSGHANLIEIH
LGHLNLEDEAAIAILNALETCPSSIEALEMAGNAITSEAAPAIAACITSKKDSLTKLNLS
ENELKDAGAVAIGRAVAVEEEFGRLMMVDLSSNGIGSGGARILAKAVAGKPVFRLLNING
NFISNKGIEDVREIFQNSPRMLGPLDANNPDGEDDD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggattctactcatggtcagtcgacttatggtcacttgcgttcaattaagttgtggcct
cctagccaaaccaccaggcaagtgcttgtggatcgtatagtaaaaaacctcacaactccc
tccattttatcgcgaaaatatggtcttctaagcaaagaagaagccgaagaagatgctaaa
caaatcgagtctgcagccttttctgctgcaaaccaacactttgaaaaagaaccagatagc
gatggggcatcaactgtgcaagtttacgctagagaatccagtaaacttatggtggaagtc
gtcaaaagaggacctcgaccaaaagaggatagagatattataccagatttgttatctgac
catgaatctgttttcgacatttctggagggcgccgagcttttattgacgcggaagaagct
aaagaacttctgaaaccactaaaagaacccgaaaacaaatacacaaagatttgttttagt
aatagaagtttcggtctaccagctgcccatgtcgctgcctccattctgtcgaatctaaag
aaccaattgacagaagttgatctttcagattttgtttctagaaggccagaaccagaagct
attgaagttatgaggatgttttcatcggctctcgagggttgtgacctcagttatttgaat
ctttcgaataatactttgggtgaaagggggattcgggcattcggtgatcttttaaggtct
caagaaaatcttgttgaattgtatctgatgaatgccggtatatcggaggaagctgcaaag
gcattgcgcgagttaatcccttcatcgaagaaactcaagattcttcattttcataataac
atgattagagatggaggagcgattgccatttctcaactcgttaaagaatctccgatgcta
gaggatttcaggtgttctttggcacggatcggctctgtaggcggcgtcgctcttgccgaa
gcacttgctacttgcacccttttgaaaaagctcgatttacgcgacaacgtattcggaact
gaagccgggatcgctctaagtcggggtctatccgggcacgccaatctcatcgaaatccac
ctcggtcacctgaacctcgaggacgaagccgccatcgccattttaaacgctctagaaact
tgtccttcttccattgaagctctagagatggccggaaacgccattacttctgaagcagct
ccggcgattgctgcctgtataacttcaaagaaagattctttaaccaaattaaacttatcg
gaaaacgaactgaaggatgccggtgcggttgcgatcgggagggcggtggcggtggaggag
gagtttgggcggttgatgatggtggatttgagcagtaacgggattggaagtggtggcgca
aggatactggctaaggcggttgcgggtaaacctgtgtttaggctgctgaatattaatggt
aattttatatcgaataaagggattgaggacgtccgtgagatcttccagaattcacctcga
atgcttggacctctggatgccaataaccctgatggggaagatgatgattga
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