Cynara cardunculus var. scolymus (artichoke): 112512237
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Entry
112512237 CDS
T05604
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00906
Carotenoid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112512237
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccav01006
]
112512237
Enzymes [BR:
ccav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
112512237
Prenyltransferases [BR:
ccav01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112512237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
112512237
NCBI-ProteinID:
XP_024973873
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All DBs
Position
LG 5:complement(26651228..26654691)
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AA seq
429 aa
AA seq
DB search
MSAALIWVVSPNSDVCNGLSFLETTRVLDSSRLFAKEKGVLRSDRRRMKNVKCYSCFHEL
GFLGSNKNGRRSDVVSRRVVANPSGGLAVSSEQLVYDVVLKQAALVKEQMRSREEDMEVK
PDIVLPGTLGLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVD
GPNASHITPKALDRWESRLEDLYKGRPFDMLDAALSDTVSKFPVDIQPFKDMIDGMRMDL
KKSRYENFDELYLYCYYVAGTVGLMSVPIMGIAHESQAPTESVYNAALALGIANQLTNIL
RDVGEDARRGRVYLPQDELAQAGLSDDDIFAMKVTNKWRVFMKKQIKRARTFFDQAEEGV
TQLSSASRWPVWASLLLYRQILDEIEANDYNNFTRRAYVSKPKKIVALPVAYAKSLVSPS
SRKLEVTTG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctttaatatgggttgtttcccctaattctgatgtctgtaatggattgagt
tttttggaaacaacaagggtattagattcatcaagattgtttgcaaaagaaaagggggtt
ttgaggtctgatagaagaagaatgaagaatgtcaagtgttattcttgtttccatgaattg
gggtttttgggttcgaataaaaatgggagaagatcggacgtcgtttcgaggagggtggtg
gctaacccatctggtggattggctgtttcatctgaacaattggtttacgatgtcgttctg
aagcaagcagctttggttaaagaacaaatgagatctagggaagaagatatggaggtgaaa
ccagatattgttcttcctggaacacttggcttattgaatgaagcttatgatagatgtggt
gaagtttgtgctgaatatgccaagaccttttacttaggaacattgttgatgacacccgaa
aggcgaaaagcgatatgggcaatttacgtatggtgtaggagaaccgatgaactcgttgac
gggcctaatgcatcacatataactccaaaagctttagatcgatgggagtcgagattagaa
gatctttacaaggggcgcccttttgatatgctcgatgctgctttatccgataccgtttcc
aagtttcctgtcgacattcagccttttaaggatatgatcgatggaatgaggatggacctc
aaaaagtcaagatacgagaactttgatgagctttatttgtattgttattacgtagcaggc
acggttggattgatgagtgttccgataatggggattgcccatgaatctcaggcaccaaca
gagagtgtttataatgccgctttagctttagggatcgctaatcaactcaccaacatcctc
cgagatgtaggagaagatgcaagaagaggaagagtttacctgccacaagatgaattagcc
caagccggattgtcggatgacgacatatttgcaatgaaagtaacgaataaatggagggtt
ttcatgaaaaagcaaataaaacgtgcaagaacgttttttgaccaagcggaagaaggcgtt
acacagctgagttcagctagcagatggccggtttgggcatcgttgttgttgtatcggcaa
atactggatgagatcgaagctaacgactataataacttcacgagaagagcgtatgtgagc
aaaccgaagaagatagttgctttgcctgtggcttatgcaaaatctcttgtttccccatca
tcaagaaagttggaagtcaccacagggtaa
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