KEGG   Cynara cardunculus var. scolymus (artichoke): 112512312
Entry
112512312         CDS       T05604                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112512312
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112512312
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112512312
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112512312
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    112512312
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN zf-C3HC4 ResIII zf-RING_2 DEAD zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-rbx1 AAA_34 RING_XB3-XBAT31 zf-ANAPC11 Helicase_C zf-C3HC4_4
Other DBs
NCBI-GeneID: 112512312
NCBI-ProteinID: XP_024973958
LinkDB
Position
LG 5:complement(8951950..8954833)
AA seq 730 aa
MSVYRLPLEDEDQQPSPSIQSETNMVGFIIANIVGLQDYSGRLSGREMVGLVREPLNGFD
TNAIRVVDTRAIQVGHIEKKVASVLAPLIDSNLVHVEGIVPLPSTPINGVRSKLPCHIHI
FAKIEAFETVKXSXSXCGLYLISQNDSLFSTSESMVVKEKKKSDVDEVFKLVDENVSKSR
VMGTMEPPKDVILPDLFLHQKEGLSWLHHRENSDELPPFWEQRDDGFINLLTNYQTDKRP
EPLRGGIFADDMGLGKTLTLLSLIALDKCKISNDGTSELMGIEXDQSVVQIGKKSRTRTV
XCSKKQKTDDTLLDERKKKERIGXKMTLIVCPPSVFSTWITQLTDHTKRGRLKAYMYYGE
RTQDVSELQNYDIILTTYSTLASELNNSNAPIKKIEWWRIILDEAHMIKNDSAKQSKAVS
MLNAKRRWVVTGTPIQNGSLDLFSLMAFLRFDPFSTKSYWYSLVQRPIAQGNDKGLSRLQ
ALMATISLRRTKEKTLIGLLPRKTIITCNVELSVDERKVYDQMXTKAKTFVARYISVGSV
TYNYSTILSIILRLRQICTHXELCPLDFRSSLPSYNFEELADASNNPKLLQKLVLMLQDG
EDFDCPICLAPPTQIVITSCAHFFCRTCIIGALNHSISVCPLCRCQLSESDIFSPPPEYA
TEPNQAGSSSSCQPSSKVAALLKLLEASRNENPSIKSVIFSQFRKLLLLLEEPLKAAGFK
TLRLDGAMTA
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgagcgtttatcgattgccgctcgaagatgaagaccaacaaccatcaccatcaatccag
tcggaaaccaacatggtgggtttcattatcgccaacattgtcggattacaagactattcc
ggccgtctaagtggccgggagatggtcggtcttgttcgagaacccttgaatggcttcgac
actaacgcaatcagagtcgtcgatactcgagcaatccaagtcggccatatcgagaagaag
gtagctagtgttcttgcacctttaatcgactctaatttggttcatgttgaagggattgta
cccctacccagtacccctataaatggtgttcggtctaagctcccatgccatattcatatt
tttgcaaagatcgaagccttcgaaaccgtcaaayyctcaytttcacwatgtgggttgtat
ttgatttcacaaaatgattctctgtttagtacttctgaatctatggtcgtgaaagagaag
aaaaagagtgatgtagatgaagttttcaagttggttgatgagaatgtaagtaaaagtagg
gttatggggacaatggaacccccaaaagatgtcattctacctgatctttttctgcaccaa
aaagagggtttgagttggttgcatcaccgtgagaattccgatgaattacctccgttttgg
gaacaaagagacgatggtttcatcaacctgttgacgaattatcaaaccgacaaacggccg
gagcctttacgcggtgggatctttgcggacgatatgggattgggtaaaactctcacttta
ctttctttgattgctttggataaatgtaagatttcgaaygatggaacaagtgaactaatg
ggaatagaakatgatcaatcggttgtccaaattggtaagaaatcaagaaccagaactgtt
wattgtagcaagaaacagaaaacagatgacacccttttggatgaamgaaaaaagaaagaa
cgaataggcrcgaaaatgacattaattgtgtgcccaccttctgttttctcaacttggata
acacaattaaccgatcacaccaaaagggggcggctaaaagcatatatgtactatggggaa
cgaactcaagatgtatccgagcttcaaaactacgatataatcttgacaacttatagtact
ctagctagtgaacttaacaattcaaatgctccaataaagaagatagagtggtggcgkata
atcttggatgaagcgcatatgatcaagaacgacagtgcraaacaaagtaaagccgtgagt
atgttgaatgctaaacggagatgggttgttacaggaacacccattcaaaatgggtcgttg
gatttgttttctctcatggcatttctaagatttgatccattttcgaccaaaagttactgg
tatagcttggtgcaacgcccaattgctcaagggaacgacaaggggctctcaaggcttcag
gcgttaatggcgactatttctttgagacgaacgaaagagaaaactctgattggtttgctg
cctcgaaaaactatcattacatgtaatgtggagctttctgtagatgagcgaaaggtgtat
gatcagatggmaaccaaagccaagacatttgttgcacgatatatttctgtaggaagtgta
acatacaattactcgaccattctaagcatcattttacggcttcgccagatatgcacgcat
wtggaattatgccctttagattttagatcatcacttccatcctacaactttgaagaactt
gcagatgcatccaacaacccgaaactactccaaaagctcgttttaatgctacaagacggg
gaggatttcgattgtccgatttgcctcgctccacctactcaaatcgtcattacgtcttgt
gcccacttcttttgtcgaacctgcatcatcggagctctaaaccattccatatctgtctgc
ccactctgccgctgccagttgtctgaatctgacatcttctcaccaccacccgagtatgcc
accgagcccaatcaagctggttcttcctcctcttgtcaaccatcttccaaagtggctgct
cttttaaaacttctagaagcatcaagaaacgaaaacccgtccataaaatccgtcattttc
tctcagtttcgtaaactgctgcttttactcgaagaaccattgaaagcggccggattcaag
actctgcggttagatggagcaatgacggca

DBGET integrated database retrieval system