KEGG   Cynara cardunculus var. scolymus (artichoke): 112512436
Entry
112512436         CDS       T05604                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112512436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112512436
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112512436
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    112512436
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING Beta-prop_NOL10_N YpzI zf-RING_6
Other DBs
NCBI-GeneID: 112512436
NCBI-ProteinID: XP_024974163
LinkDB
Position
LG 5:6595143..6599472
AA seq 301 aa
MAPGGGVCKDVIESHPKALKYETAGTKNDKSIIRTATGKHGMQSTNGVHELLECPVCTTL
MYPPIHQCPNGHTLCSNCKTRVHNCCPTCRLEMGNIRCLALEKVAESLELPCRHQTLGCH
DIFPYYSKLKHEQNCRFRPYNCPYAGSECSVTGDIPYLVAHLKDDHNVDMHDGCTFNHRY
VKSNPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAKKFSYSL
EVGGYGRKFTWQGVPRSIRDGHRKVRDSQDGLVIPRNLALFFSGGDRQELKLRVSGRIWK
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atggctccagggggcggtgtttgcaaagatgttatcgaatcgcaccctaaagctttgaag
tatgagacagcaggaacaaagaacgataagagcattataaggacagcaactggaaaacat
ggaatgcagtcaacaaatggtgttcatgagcttcttgaatgccctgtgtgcacaacctta
atgtaccccccaattcatcagtgtccaaatggccacactttgtgctcaaactgcaaaact
agagtacacaactgttgcccaacgtgccggcttgagatgggaaacataaggtgtttggca
ttggagaaagtagccgaatcgttggaacttccatgccgacaccaaactcttggctgccat
gatatcttcccttactatagcaagctgaagcacgagcaaaattgccgatttcgcccttac
aattgtccctatgctggatcagagtgctcggttaccggtgatatcccatatcttgtggct
catttgaaggatgatcataatgtcgatatgcatgatggatgcactttcaaccatcgatat
gtcaaatctaaccctcatgaagttgaaaacgcgacgtggatgctaactgtattcaattgc
tatggacgacaattctgtttgcactttgaggcatttcagctcggaatggctccggtctac
atatcgttcctaaggttcatgggtgaggatagtgaagccaagaagttcagttactcgtta
gaagtgggagggtacggacgtaagttcacatggcaaggtgttccgaggagcatacgggat
ggtcaccggaaagttcgtgatagtcaagacggactagtgattcccaggaatttggctctc
tttttctccggtggagaccggcaagaactcaagctaagagttagcggtcggatttggaaa
gaatag

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